RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TO15178 435 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 DEAF1O75398 565 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 LDLRP01130 860 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 DBIP07108 87 aaKnown RBP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 NPIPA8P0DM63 369 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 RPS4Y1P22090 263 aaKnown RBP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 PRKAR1BP31321 381 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 OR1E2P47887 323 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 PSPHP78330 225 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 VLDLRP98155 873 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 LARS2Q15031 903 aaKnown RBP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 TRIP10Q15642 601 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 PLAG1Q6DJT9 500 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 DTX1Q86Y01 620 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 VRK2Q86Y07 508 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 OR5L2Q8NGL0 311 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 TP53INP1Q96A56 240 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 C7orf34Q96L11 122 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 IMMP1LQ96LU5 166 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 LMF1Q96S06 567 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 RSPO3Q9BXY4 272 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 ZNF232Q9UNY5 417 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 ZNF443Q9Y2A4 671 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-213ENST00000565834 PCDHGA6Q9Y5G7 932 aa17.32■□□□□ 0.36
COMMD4-213ENST00000565834 CDC14CA4D256 554 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 CLOCKO15516 846 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 ZFAND5O76080 213 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 IL33O95760 270 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 CST1P01037 141 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 THBS1P07996 1170 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 IL7RP16871 459 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 PTDSS1P48651 473 aaKnown RBP17.31■□□□□ 0.36
COMMD4-213ENST00000565834 PSMD4P55036 377 aaKnown RBP17.31■□□□□ 0.36
COMMD4-213ENST00000565834 KCNC4Q03721 635 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 CAMK2BQ13554 666 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 DHRS4L2Q6PKH6 230 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 SLC34A3Q8N130 599 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 TMBIM1Q969X1 311 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 KIAA1143Q96AT1 154 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-213ENST00000565834 EFHD2Q96C19 240 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-213ENST00000565834 CENPNQ96H22 339 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-213ENST00000565834 VPS50Q96JG6 964 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 SLC13A4Q9UKG4 626 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 PCDHGA10Q9Y5H3 936 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 AK5Q9Y6K8 562 aa17.31■□□□□ 0.36
COMMD4-213ENST00000565834 CENPVL1A0A0U1RR11 272 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 SYT5O00445 386 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 PEX12O00623 359 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 CASQ2O14958 399 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-213ENST00000565834 IFNW1P05000 195 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 KRT20P35900 424 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 NRG3P56975 720 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 RTP5Q14D33 572 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 MAPK14Q16539 360 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 LIN52Q52LA3 116 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 PIWIL3Q7Z3Z3 882 aaKnown RBP17.3■□□□□ 0.36
COMMD4-213ENST00000565834 RAB43Q86YS6 212 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 PRR22Q8IZ63 422 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 M1APQ8TC57 530 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 ELP5Q8TE02 316 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 THAP3Q8WTV1 239 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-213ENST00000565834 APOBEC4Q8WW27 367 aaKnown RBP17.3■□□□□ 0.36
COMMD4-213ENST00000565834 NRG4Q8WWG1 115 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 BDH2Q9BUT1 245 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 DEFB126Q9BYW3 111 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 LIN28AQ9H9Z2 209 aaKnown RBP17.3■□□□□ 0.36
COMMD4-213ENST00000565834 ZNF160Q9HCG1 818 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 DNAJB9Q9UBS3 223 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 KCNE5Q9UJ90 142 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 ABCG2Q9UNQ0 655 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 SLC9A8Q9Y2E8 581 aa17.3■□□□□ 0.36
COMMD4-213ENST00000565834 MRPS18BQ9Y676 258 aaKnown RBP17.3■□□□□ 0.36
COMMD4-213ENST00000565834 UGT2B17O75795 530 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 LGI1O95970 557 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 LIPCP11150 499 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 ITGA2P17301 1181 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 IL12BP29460 328 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 DCTP40126 519 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 PLCXD2Q0VAA5 305 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 IL10RAQ13651 578 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 PUM1Q14671 1186 aaKnown RBP eCLIP17.29■□□□□ 0.36
COMMD4-213ENST00000565834 EIPR1Q53HC9 387 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 ZNF836Q6ZNA1 936 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 COMTD1Q86VU5 262 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 CARM1Q86X55 608 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 DIO2Q92813 273 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 GPN2Q9H9Y4 310 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-213ENST00000565834 MMP25Q9NPA2 562 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 KLHL28Q9NXS3 571 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 IL17BQ9UHF5 180 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 FBXL4Q9UKA2 621 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 EXPH5Q8NEV8 1989 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 PRAMEF25A6NGN4 478 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 GNGT2O14610 69 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 REM1O75628 298 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 HPP00738 406 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 NID1P14543 1247 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 ABCD3P28288 659 aa17.29■□□□□ 0.36
COMMD4-213ENST00000565834 PEX2P28328 305 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms