RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SAMD14Q8IZD0 417 aaPredicted RBP9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 GBP7Q8N8V2 638 aaPredicted RBP9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 GPATCH11Q8N954 259 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 OR52B6Q8NGF0 335 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 MRFAP1L1Q96HT8 127 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 ADGRG7Q96K78 797 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 DOK1Q99704 481 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 FAM118BQ9BPY3 351 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 HEMGNQ9BXL5 484 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 MMP28Q9H239 520 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 ZNF275Q9NSD4 429 aaPredicted RBP9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 PAQR5Q9NXK6 330 aaPredicted RBP9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 KLHL42Q9P2K6 505 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 ICAM5Q9UMF0 924 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 SOX13Q9UN79 622 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 AUP1Q9Y679 476 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 POMT1Q9Y6A1 747 aa9.09□□□□□ -0.95
HDGFL3-204ENST00000563790 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 C2orf92A0A1B0GVN3 265 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 CCDC162PA2VCL2 907 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 OR2M5A3KFT3 312 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 PRAMEF25A6NGN4 478 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 PPM1BO75688 479 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 METTL18O95568 372 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 MBD3O95983 291 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 CATP04040 527 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 IGHV4-38-2P0DP08 117 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 CDH1P12830 882 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 CD33P20138 364 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 IGHV1-2P23083 117 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 COL8A2P25067 703 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 IMPA1P29218 277 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 ATP5DP30049 168 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 RPL4P36578 427 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 TBPL1P62380 186 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 IGLV3-21P80748 117 aaPredicted RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 ID2Q02363 134 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 GBX1Q14549 363 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC9B1Q4ZJI4 515 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 Q6YL49 198 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 DGAT2L6Q6ZPD8 337 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 NUP54Q7Z3B4 507 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF433Q8N7K0 673 aaPredicted RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 ABHD11Q8NFV4 315 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 OR4K1Q8NGD4 311 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 OR8K1Q8NGG5 319 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 PANX3Q96QZ0 392 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 TTC1Q99614 292 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 ASCL2Q99929 193 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 CNTD2Q9H8S5 307 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 PIH1D1Q9NWS0 290 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 IFNKQ9P0W0 207 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 FEZ2Q9UHY8 353 aaPredicted RBP9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 AP4B1Q9Y6B7 739 aa9.08□□□□□ -0.96
HDGFL3-204ENST00000563790 SPOPO43791 374 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 MGRN1O60291 552 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 GPR137BO60478 399 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 SYNGR4O95473 234 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 PLATP00750 562 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 GBAP04062 536 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 CLPSP04118 112 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 NAGAP17050 411 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 PTPN7P35236 360 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 SCTRP47872 440 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 HERVK_113P63132 956 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ERVK-8P63133 956 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 HMGCS1Q01581 520 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ACVR1Q04771 509 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 RCN2Q14257 317 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 POU6F1Q14863 301 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 DEFB112Q30KQ8 113 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ANKRD22Q5VYY1 191 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 CASC4Q6P4E1 433 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 GALNT10Q86SR1 603 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 OR10D3Q8NH80 312 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 STYXQ8WUJ0 223 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF778Q96MU6 729 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 C1QTNF6Q9BXI9 259 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ERVK-6Q9BXR3 956 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 NHEJ1Q9H9Q4 299 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 NOX4Q9NPH5 578 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ABHD10Q9NUJ1 306 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 NTMQ9P121 344 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 KLHL13Q9P2N7 655 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 PRODH2Q9UF12 536 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC2A6Q9UGQ3 507 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 TFR2Q9UP52 801 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 ERVK-19Q9WJR5 959 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 EFR3BQ9Y2G0 817 aa9.07□□□□□ -0.96
HDGFL3-204ENST00000563790 A0A1W2PR80 420 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 CTAGE15A4D2H0 777 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 H7C0C1 242 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 EIF1AYO14602 144 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 B3GALT2O43825 422 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 AKR1B10O60218 316 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 CLEC3AO75596 197 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 SERPINA6P08185 405 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms