RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 UHMK1Q8TAS1 419 aaKnown RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 TRPC4APQ8TEL6 797 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 TM4SF18Q96CE8 201 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 MTBPQ96DY7 904 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZBED6CLQ96FA7 236 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 MARK4Q96L34 752 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 HS6ST2Q96MM7 605 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 BTBD9Q96Q07 612 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 BBS4Q96RK4 519 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 NTMT1Q9BV86 223 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 C12orf49Q9H741 205 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 FARSBQ9NSD9 589 aaKnown RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF701Q9NV72 531 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 TAS2R9Q9NYW1 312 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 SNX6Q9UNH7 406 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 VDAC3Q9Y277 283 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 A0A1W2PP18 115 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 SHISA8B8ZZ34 492 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 LINC01387J3KSC0 135 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 J3QL48 77 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 KLF4O43474 513 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 NDUFB5O43674 189 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 TLX2O43763 284 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 TMCC2O75069 709 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 URI1O94763 535 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 AQP8O94778 261 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 KLHL2O95198 593 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 PDYNP01213 254 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 IL3P08700 152 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 CT45A8P0DMV1 189 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 CT45A9P0DMV2 189 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 TSPAN8P19075 237 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ACVR1BP36896 505 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 SERPINB8P50452 374 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 PLTPP55058 493 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 KRTAP1-1Q07627 177 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 TRAF3Q13114 568 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 NAB1Q13506 487 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ETFDHQ16134 617 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 CTU2Q2VPK5 515 aaKnown RBP9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 CT45A2Q5DJT8 189 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF628Q5EBL2 1059 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 NPSR1Q6W5P4 371 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 RPS27LQ71UM5 84 aaKnown RBP9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 CREG2Q8IUH2 290 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 FAM9CQ8IZT9 166 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF619Q8N2I2 560 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR4N2Q8NGD1 307 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 RAB3IL1Q8TBN0 382 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF675Q8TD23 568 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 DUSP19Q8WTR2 217 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 FBXW5Q969U6 566 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 TBL1XR1Q9BZK7 514 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ALG2Q9H553 416 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 WHRNQ9P202 907 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 PCTPQ9UKL6 214 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 MCTS1Q9ULC4 181 aaKnown RBP9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 RNF115Q9Y4L5 304 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 SAR1BQ9Y6B6 198 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 ABCA1O95477 2261 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
CDC42BPB-207ENST00000560492 CCDC189A1A4V9 331 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 A8MV72 311 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 CD5LO43866 347 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 COQ9O75208 318 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 OTCP00480 354 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 OPN1LWP04000 364 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 CD3EP07766 207 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 PAX1P15863 534 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 IL32P24001 234 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 MAGEA4P43358 317 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 GAS1P54826 345 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 PSPHP78330 225 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 GALNT1Q10472 559 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNHIT3Q15649 155 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 DECR1Q16698 335 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 TECRLQ5HYJ1 363 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 TEX35Q5T0J7 233 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 METTL2BQ6P1Q9 378 aaKnown RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 STAC2Q6ZMT1 411 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 BEND4Q6ZU67 534 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 CYS1Q717R9 158 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 MARCH3Q86UD3 253 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 SAMD14Q8IZD0 417 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 FADS6Q8N9I5 356 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 SLC9A6Q92581 669 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 C1GALT1C1Q96EU7 318 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 GMPPAQ96IJ6 420 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 VSTM2LQ96N03 204 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 ERP44Q9BS26 406 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 NGBQ9NPG2 151 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 FLRT3Q9NZU0 649 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 XPR1Q9UBH6 696 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 TMCO1Q9UM00 188 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 LIPT1Q9Y234 373 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 AP4B1Q9Y6B7 739 aa9.4□□□□□ -0.9
CDC42BPB-207ENST00000560492 PRR14LQ5THK1 2151 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 B4DXG7 233 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms