RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TMBIM1Q969X1 311 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 OMA1Q96E52 524 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 HSH2DQ96JZ2 352 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 SEPHS2Q99611 448 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 DCLRE1BQ9H816 532 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 S100A14Q9HCY8 104 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 CCM2LQ9NUG4 571 aaPredicted RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 SLC13A4Q9UKG4 626 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 AP4S1Q9Y587 144 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 AGAP5A6NIR3 686 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 WWP2O00308 870 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 ABCB7O75027 752 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 KRT36O76013 467 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 IGKV1D-16P01601 117 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 THBS1P07996 1170 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 RAP2AP10114 183 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 IL7RP16871 459 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 NAGAP17050 411 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 ABCD3P28288 659 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 PRKAR1BP31321 381 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 PNLIPRP2P54317 469 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 RRADP55042 308 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 CHAF1BQ13112 559 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 AIMP2Q13155 320 aaKnown RBP15.56■□□□□ 0.08
SNX1-203ENST00000558040 LIN52Q52LA3 116 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 IFI44LQ53G44 452 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 EIPR1Q53HC9 387 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 ZNF311Q5JNZ3 666 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 TBCELQ5QJ74 424 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 TCTN3Q6NUS6 607 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 JMJD6Q6NYC1 403 aaPredicted RBP15.56■□□□□ 0.08
SNX1-203ENST00000558040 SMYD1Q8NB12 490 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 ZNF527Q8NB42 609 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 EFHD2Q96C19 240 aaPredicted RBP15.56■□□□□ 0.08
SNX1-203ENST00000558040 PINK1Q9BXM7 581 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 QRSL1Q9H0R6 528 aaKnown RBP15.56■□□□□ 0.08
SNX1-203ENST00000558040 ARMC7Q9H6L4 198 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 ATP13A2Q9NQ11 1180 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 ARMC1Q9NVT9 282 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 FBXO34Q9NWN3 711 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 NPFFR2Q9Y5X5 522 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 AHCTF1Q8WYP5 2266 aa15.56■□□□□ 0.08
SNX1-203ENST00000558040 TMEM200CA6NKL6 621 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 ZNF891A8MT65 544 aaPredicted RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 CELA2AP08217 269 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 ITGAMP11215 1152 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 FCGR1AP12314 374 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 CD247P20963 164 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 RPS4Y1P22090 263 aaKnown RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 DCTP40126 519 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 KCNJ5P48544 419 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 ATP12AP54707 1039 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 EFR3AQ14156 821 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 RCN1Q15293 331 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 ZSWIM7Q19AV6 140 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 CRTC2Q53ET0 693 aaPredicted RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 DCAF10Q5QP82 559 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 DHRS4L2Q6PKH6 230 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 PRR22Q8IZ63 422 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 FAM86B1Q8N7N1 296 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 CLEC1AQ8NC01 280 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 PAPD5Q8NDF8 572 aaKnown RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 SNIP1Q8TAD8 396 aaKnown RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 GEMIN6Q8WXD5 167 aaKnown RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 LMF1Q96S06 567 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 ADOQ96SZ5 270 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 DPH1Q9BZG8 443 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 LIN28AQ9H9Z2 209 aaKnown RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 UBQLN4Q9NRR5 601 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 KLHL28Q9NXS3 571 aa15.55■□□□□ 0.08
SNX1-203ENST00000558040 ZNF443Q9Y2A4 671 aaPredicted RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 YARS2Q9Y2Z4 477 aaKnown RBP15.55■□□□□ 0.08
SNX1-203ENST00000558040 OR6C70A6NIJ9 312 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 SYT5O00445 386 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 HNRNPRO43390 633 aaKnown RBP15.54■□□□□ 0.08
SNX1-203ENST00000558040 TSPAN2O60636 221 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 PPM1BO75688 479 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 UGT2B17O75795 530 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 OR2J2O76002 312 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 NADKO95544 446 aaPredicted RBP15.54■□□□□ 0.08
SNX1-203ENST00000558040 ATP6V1G2O95670 118 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 FESP07332 822 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 NID1P14543 1247 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 HPGDP15428 266 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 Q0VFX4 171 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 ZNF141Q15928 474 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 DUSP7Q16829 419 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 VTCN1Q7Z7D3 282 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 ZAR1Q86SH2 424 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 RPS19BP1Q86WX3 136 aaKnown RBP15.54■□□□□ 0.08
SNX1-203ENST00000558040 VRK2Q86Y07 508 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 DND1Q8IYX4 353 aaKnown RBP15.54■□□□□ 0.08
SNX1-203ENST00000558040 ARMC10Q8N2F6 343 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 AMER2Q8N7J2 671 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 TMEM102Q8N9M5 508 aaPredicted RBP15.54■□□□□ 0.08
SNX1-203ENST00000558040 SLCO4A1Q96BD0 722 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 NAF1Q96HR8 494 aaKnown RBP15.54■□□□□ 0.08
SNX1-203ENST00000558040 ZNF354BQ96LW1 612 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 EVA1AQ9H8M9 152 aa15.54■□□□□ 0.08
SNX1-203ENST00000558040 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms