RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RNF122Q9H9V4 155 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 PLSCR4Q9NRQ2 329 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 FBXO5Q9UKT4 447 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 B3GALT5Q9Y2C3 310 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 GPR52Q9Y2T5 361 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 MRPS18CQ9Y3D5 142 aaKnown RBP6.12□□□□□ -1.43
ATXN3-236ENST00000556220 JRKLQ9Y4A0 524 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 X6R8D5 127 aa6.12□□□□□ -1.43
ATXN3-236ENST00000556220 WNK1Q9H4A3 2382 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 ZCWPW2A0A1B0GU75 182 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 TCRBV7S3A2A0A539 114 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 RAD51CO43502 376 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 DLX3O60479 287 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 SEC31AO94979 1220 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 SCELO95171 688 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 SLU7O95391 586 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 GPR75O95800 540 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 FAM153BP0C7A2 387 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PEPDP12955 493 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 NAGAP17050 411 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 ITGA2P17301 1181 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 KRT15P19012 456 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 USF1P22415 310 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 HIST1H1TP22492 207 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 DPP4P27487 766 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 ABCD3P28288 659 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 GALNSP34059 522 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 KCNJ1P48048 391 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 CDKN2DP55273 166 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 EEFSECP57772 596 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 VSNL1P62760 191 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 DEFA6Q01524 100 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 CYP1B1Q16678 543 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 FAM153CQ494X1 144 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PRR31Q5SQ13 230 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 NCMAPQ5T1S8 102 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 FAM166AQ6J272 317 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 ZDHHC24Q6UX98 284 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 C4orf22Q6V702 233 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 NUP54Q7Z3B4 507 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PLCZ1Q86YW0 608 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 LMNTD2Q8IXW0 634 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PRR22Q8IZ63 422 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 MMGT1Q8N4V1 131 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 C17orf47Q8NEP4 570 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 C1orf54Q8WWF1 131 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 HGDQ93099 445 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PPP1R14AQ96A00 147 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 VPS39Q96JC1 886 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 ADAD1Q96M93 576 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 CCDC140Q96MF4 163 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 NODALQ96S42 347 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 NDNQ99608 321 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 SYT3Q9BQG1 590 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PELOQ9BRX2 385 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 DDX47Q9H0S4 455 aaKnown RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 CHODLQ9H9P2 273 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 GALNT9Q9HCQ5 603 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 FANCFQ9NPI8 374 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 DNAJC11Q9NVH1 559 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 MS4A12Q9NXJ0 267 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 GRHL1Q9NZI5 618 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF490Q9ULM2 529 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-236ENST00000556220 SAR1BQ9Y6B6 198 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 PLCE1Q9P212 2302 aa6.11□□□□□ -1.43
ATXN3-236ENST00000556220 RYR3Q15413 4870 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ESYT3A0FGR9 886 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 SDR42E2A6NKP2 422 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 WASHC1A8K0Z3 465 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 RTCAO00442 366 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 AIFM1O95831 613 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 TPSB2P20231 275 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PSMB1P20618 241 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 IL11P20809 199 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 TLX1P31314 330 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 GDF5P43026 501 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 HNMTP50135 292 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 B3GALT5-AS1P59052 145 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 IRX1P78414 480 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 HMGCS1Q01581 520 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 SLAMF1Q13291 335 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 SNX1Q13596 522 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 TPSAB1Q15661 275 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 WHAMMP3Q1A5X7 153 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 AP5B1Q2VPB7 878 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 CTU2Q2VPK5 515 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ADNP2Q6IQ32 1131 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PEX26Q7Z412 305 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 GPSM1Q86YR5 675 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 UBQLNLQ8IYU4 475 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF615Q8N8J6 731 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 FNDC9Q8TBE3 224 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ACTRT1Q8TDG2 376 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ZFAND2BQ8WV99 257 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF669Q96BR6 464 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms