RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GPR68Q15743 365 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 CYBRD1Q53TN4 286 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 ATP1A1-AS1Q5TC04 95 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 TYW3Q6IPR3 259 aaKnown RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 FRRS1Q6ZNA5 592 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 RPS19BP1Q86WX3 136 aaKnown RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 PEX5LQ8IYB4 626 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 PRR22Q8IZ63 422 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 AMER2Q8N7J2 671 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 TMEM102Q8N9M5 508 aaPredicted RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 ZNF527Q8NB42 609 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 GOLM1Q8NBJ4 401 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 RASSF5Q8WWW0 418 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 LZICQ8WZA0 190 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 DIO2Q92813 273 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 STMN2Q93045 179 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 TAMM41Q96BW9 452 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 EFHD2Q96C19 240 aaPredicted RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 OMA1Q96E52 524 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 THOC3Q96J01 351 aaKnown RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 COL21A1Q96P44 957 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 HOXD1Q9GZZ0 328 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 LHPPQ9H008 270 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 SAP130Q9H0E3 1048 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 DCAF13Q9NV06 445 aaKnown RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 OLAHQ9NV23 265 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 FBXO34Q9NWN3 711 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 SEC14L3Q9UDX4 400 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 TEKT2Q9UIF3 430 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 ZNF232Q9UNY5 417 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 POLHQ9Y253 713 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 YARS2Q9Y2Z4 477 aaKnown RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 IFT52Q9Y366 437 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 NPFFR2Q9Y5X5 522 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 GPC6Q9Y625 555 aaPredicted RBP10.18□□□□□ -0.78
TMEM260-208ENST00000555905 PCSK5Q92824 1860 aa10.18□□□□□ -0.78
TMEM260-208ENST00000555905 DSPPQ9NZW4 1301 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ARGFXA6NJG6 315 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 TMEM200CA6NKL6 621 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 MASP2O00187 686 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ITGA10O75578 1167 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 GCM2O75603 506 aaPredicted RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 PPM1BO75688 479 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 IGKV1D-16P01601 117 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 GPIP06744 558 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 DBIP07108 87 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 UMPSP11172 480 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 HPGDP15428 266 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 NAGAP17050 411 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 HOXB6P17509 224 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 WT1P19544 449 aaPredicted RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 PSMA4P25789 261 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ITGA3P26006 1051 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ERFP50548 548 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 PNLIPRP2P54317 469 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 MLF1P58340 268 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ELF3P78545 371 aaPredicted RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 EFR3AQ14156 821 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 LARS2Q15031 903 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 BROXQ5VW32 411 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 AP1ARQ63HQ0 302 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 FCRLBQ6BAA4 426 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 H3F3CQ6NXT2 135 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 C16orf47Q6ZP98 133 aaPredicted RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 CBLL1Q75N03 491 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 EIF3MQ7L2H7 374 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 OLIG3Q7RTU3 272 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 DND1Q8IYX4 353 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ARMC10Q8N2F6 343 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 OR52P1PQ8NH57 321 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 BRIX1Q8TDN6 353 aaKnown RBP10.17□□□□□ -0.78
TMEM260-208ENST00000555905 GATA6Q92908 595 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 TPD52L3Q96J77 140 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ZNF354BQ96LW1 612 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 LMF1Q96S06 567 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ADOQ96SZ5 270 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 UGT2B28Q9BY64 529 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 CDCP1Q9H5V8 836 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 ARMC7Q9H6L4 198 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 UBQLN4Q9NRR5 601 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 SLC13A4Q9UKG4 626 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 BAG5Q9UL15 447 aa10.17□□□□□ -0.78
TMEM260-208ENST00000555905 TCRBV5S2A0A599 114 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 TCRBV3S1A0A5B6 114 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 DHRS12A0PJE2 317 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 OR6C70A6NIJ9 312 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 AGAP5A6NIR3 686 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 EFSO43281 561 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 TSPAN2O60636 221 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 ENTPD5O75356 428 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 PRKD3O94806 890 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 MFN2O95140 757 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 UTS2O95399 124 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
TMEM260-208ENST00000555905 NADKO95544 446 aaPredicted RBP10.16□□□□□ -0.78
TMEM260-208ENST00000555905 OPN1SWP03999 348 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 C8BP07358 591 aa10.16□□□□□ -0.78
TMEM260-208ENST00000555905 THBS1P07996 1170 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms