RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 SCN3AQ9NY46 2000 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 KANSL1LA0AUZ9 987 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SLC22A23A1A5C7 686 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 PRR23AA6NEV1 266 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SHISA7A6NL88 538 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 A8MV72 311 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MAGEB17A8MXT2 336 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 C10orf142B7Z368 130 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 NPIPB11E5RHQ5 1161 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CACNB4O00305 520 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FOXD2O60548 495 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 NHLRC4P0CG21 123 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 C1GALT1C1LP0DN25 315 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 ACADSP16219 412 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 GABRB1P18505 474 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 PRPS1L1P21108 318 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 ATP6V1C1P21283 382 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 HTR1EP28566 365 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 GSK3BP49841 420 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 TPMTP51580 245 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CLCNKAP51800 687 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 HNRNPFP52597 415 aaKnown RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 F2RL1P55085 397 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CLDN2P57739 230 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 KIAA1024LP59773 190 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 ACSM2AQ08AH3 577 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FGFBP1Q14512 234 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 PUM1Q14671 1186 aaKnown RBP eCLIP4.42□□□□□ -1.73e-8■□□□□ 8.5
PPP4R3A-204ENST00000554574 PYCR3Q53H96 274 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SPIN4Q56A73 249 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SPANXN4Q5MJ08 99 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 LCN8Q6JVE9 175 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SLC2A7Q6PXP3 512 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MSANTD1Q6ZTZ1 278 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 LPCAT2Q7L5N7 544 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 TMPRSS11BQ86T26 416 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SPATA24Q86W54 205 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 AQP12AQ8IXF9 295 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 RIMKLAQ8IXN7 391 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 KRTCAP2Q8N6L1 136 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 OR2T34Q8NGX1 318 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 RPLP0P6Q8NHW5 317 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 HUS1BQ8NHY5 278 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SLC5A11Q8WWX8 675 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 STARD8Q92502 1023 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 KLK6Q92876 244 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 UBE2E3Q969T4 207 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 NAF1Q96HR8 494 aaKnown RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CGREF1Q99674 301 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 APOOQ9BUR5 198 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 TRIM15Q9C019 465 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 PCBD2Q9H0N5 130 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 UBE2ZQ9H832 354 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SGK2Q9HBY8 427 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CIDEBQ9UHD4 219 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 NEUROG3Q9Y4Z2 214 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SPAG17Q6Q759 2223 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SCN2AQ99250 2005 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 TRBV5-3A0A0A0MS03 114 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 LRRC72A6NJI9 287 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FAM90A8PA6NJQ4 464 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MASP2O00187 686 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 TAF4O00268 1085 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FPGTO14772 594 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 ARPC2O15144 300 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SLC31A1O15431 190 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 LATO43561 262 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 SLC25A17O43808 307 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 PLAUP00749 431 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 IGLV3-19P01714 112 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FAM90A13PP0C7W8 464 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FAM90A24PP0C7X0 464 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 GABRG2P18507 467 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MAKP20794 623 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 IDSP22304 550 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 HNRNPA2B1P22626 353 aaKnown RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 TACR3P29371 465 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MAT2AP31153 395 aaKnown RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 ASMTP46597 345 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 LIPEQ05469 1076 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 AIMP2Q13155 320 aaKnown RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 DDX39BQ13838 428 aaKnown RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 MLF2Q15773 248 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 HIST2H2ACQ16777 129 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 COL28A1Q2UY09 1125 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 LRIF1Q5T3J3 769 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 OGFRL1Q5TC84 451 aaPredicted RBP4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 GPR139Q6DWJ6 353 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 HIST2H2AA3Q6FI13 130 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CAMKMTQ7Z624 323 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 GPR180Q86V85 440 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 C17orf64Q86WR6 236 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 RAB42Q8N4Z0 105 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 FAM47BQ8NA70 645 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 CATSPER1Q8NEC5 780 aa4.42□□□□□ -1.7
PPP4R3A-204ENST00000554574 OR8J2Q8NGG1 315 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms