RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 TMEM52Q8NDY8 209 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 SLC38A4Q969I6 547 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FKBP14Q9NWM8 211 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 KNL1Q8NG31 2342 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 CACNA1GO43497 2377 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 H3BN98 237 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 CDK1P06493 297 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 CCNYL3P0C7X3 344 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 FTH1P19P0C7X4 201 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 ACP2P11117 423 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 PSMB9P28065 219 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 IFNGR2P38484 337 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 CAPZBP47756 277 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 HNRNPKP61978 463 aaKnown RBP eCLIP14.28□□□□□ -0.121e-7■■■■□ 26.3
ABCD4-218ENST00000553486 LARS2Q15031 903 aaKnown RBP14.28□□□□□ -0.12
ABCD4-218ENST00000553486 DUSP5Q16690 384 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 PRTGQ2VWP7 1150 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 DEFB110Q30KQ9 67 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 HLA-BQ31612 363 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 SLX4IPQ5VYV7 408 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 GLRX5Q86SX6 157 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 CDRT4Q8N9R6 151 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 OR4K5Q8NGD3 323 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 ADAMTS14Q8WXS8 1223 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 ZG16BQ96DA0 208 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 STACQ99469 402 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 ADAP2Q9NPF8 381 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 MAN2C1Q9NTJ4 1040 aa14.28□□□□□ -0.12
ABCD4-218ENST00000553486 AP3D1O14617 1153 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 AQP9O43315 295 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 CHST10O43529 356 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 HCRTR1O43613 425 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 FCMRO60667 390 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 TPST2O60704 377 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 RDH16O75452 317 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 BCL10O95999 233 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 CDK4P11802 303 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 GSTM3P21266 225 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 SOX18P35713 384 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 CSNK1EP49674 416 aaKnown RBP14.27□□□□□ -0.12
ABCD4-218ENST00000553486 ST3GAL3Q11203 375 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 TRAM2Q15035 370 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 PRICKLE4Q2TBC4 344 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 UBE2UQ5VVX9 321 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 TYW3Q6IPR3 259 aaKnown RBP14.27□□□□□ -0.12
ABCD4-218ENST00000553486 C1orf94Q6P1W5 598 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 NLGN4XQ8N0W4 816 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 STX19Q8N4C7 294 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 MORN4Q8NDC4 146 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 OR9A4Q8NGU2 314 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 TRUB1Q8WWH5 349 aaKnown RBP14.27□□□□□ -0.12
ABCD4-218ENST00000553486 ANKRD9Q96BM1 317 aaPredicted RBP14.27□□□□□ -0.12
ABCD4-218ENST00000553486 YIPF6Q96EC8 236 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 SDF2Q99470 211 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 MAP3K3Q99759 626 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 DUSP22Q9NRW4 184 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 MAT2BQ9NZL9 334 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 NDOR1Q9UHB4 597 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 MKLN1Q9UL63 735 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 SATB2Q9UPW6 733 aa14.27□□□□□ -0.12
ABCD4-218ENST00000553486 ZNF443Q9Y2A4 671 aaPredicted RBP14.27□□□□□ -0.12
ABCD4-218ENST00000553486 A0A1B0GVT2 93 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 BLACEA4D250 179 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 CYP7B1O75881 506 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 SOX30O94993 753 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 ZIC2O95409 532 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 AK1P00568 194 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 SLC35E2P0CK97 266 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 RGS8P57771 180 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 SNRPGP62308 76 aaKnown RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 TBCEQ15813 527 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 EIPR1Q53HC9 387 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 EXOSC6Q5RKV6 272 aaKnown RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 CASP12Q6UXS9 341 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 ARHGEF39Q8N4T4 335 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 SIMC1Q8NDZ2 872 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 Q96MT0 163 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 SH3GL3Q99963 347 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
ABCD4-218ENST00000553486 CNOT2Q9NZN8 540 aaKnown RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 HEMK1Q9Y5R4 338 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-218ENST00000553486 LMO7DNF2Z398 122 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 MAN1A2O60476 641 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 BCAS1O75363 584 aaPredicted RBP14.26□□□□□ -0.13
ABCD4-218ENST00000553486 GABARAPO95166 117 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 SOX14O95416 240 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 THBS1P07996 1170 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 RNH1P13489 461 aaKnown RBP14.26□□□□□ -0.13
ABCD4-218ENST00000553486 MMP11P24347 488 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 NUDT6P53370 316 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 NXPH1P58417 271 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 MGAT2Q10469 447 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 DUSP8Q13202 625 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 C12orf73Q69YU5 71 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 OGFOD3Q6PK18 319 aa14.26□□□□□ -0.13
ABCD4-218ENST00000553486 DBX2Q6ZNG2 339 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms