RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TLE3Q04726 772 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 MALLQ13021 153 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 CLECL1Q8IZS7 167 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 OR6N2Q8NGY6 317 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 FANK1Q8TC84 345 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 DHRS1Q96LJ7 313 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF559Q9BR84 538 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 SMOC1Q9H4F8 434 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 LAMP5Q9UJQ1 280 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 ANKRD28O15084 1053 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 BMP1P13497 986 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 PRKACGP22612 351 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 IL32P24001 234 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 ARNTP27540 789 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 OR12D2P58182 307 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 GABREP78334 506 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 EXOSC7Q15024 291 aaKnown RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 LILRA2Q8N149 483 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 SPEF1Q9Y4P9 236 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 A0A0G2JPF8 293 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 HNRNPCL3B7ZW38 293 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 FMO6PO60774 539 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 ITGA5P08648 1049 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 HNRNPCL4P0DMR1 293 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 CPMP14384 443 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 RIPPLY1Q0D2K3 151 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 TRUB1Q8WWH5 349 aaKnown RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 C11orf24Q96F05 449 aaPredicted RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 THOC3Q96J01 351 aaKnown RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 VN1R3Q9BXE9 311 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 MCUBQ9NWR8 336 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 PFDN2Q9UHV9 154 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 SPTY2D1-AS1A0A0U1RR47 76 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 H3BMQ9 156 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 ORC5O43913 435 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 ALOX12BO75342 701 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 SOX14O95416 240 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 MT-CO3P00414 261 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 IMPA1P29218 277 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 CYB561P49447 251 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 ZXDAP98168 799 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 C6orf141Q5SZD1 244 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 PIP5KL1Q5T9C9 394 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 AGBL4Q5VU57 503 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 FTMTQ8N4E7 242 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 GALNT6Q8NCL4 622 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 TMEM19Q96HH6 336 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 COG8Q96MW5 612 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 FAM129BQ96TA1 746 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 FPR1P21462 350 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 IL18Q14116 193 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 PRAMEF20Q5VT98 475 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 KCTD18Q6PI47 426 aaPredicted RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 GNPDA2Q8TDQ7 276 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 MUCL1Q96DR8 90 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 PDLIM5Q96HC4 596 aaKnown RBP11.47□□□□□ -0.57
NR4A1-215ENST00000550557 ITPAQ9BY32 194 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 DCSTAMPQ9H295 470 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 DSN1Q9H410 356 aa11.47□□□□□ -0.57
NR4A1-215ENST00000550557 hCG_1807616A0A1W2PRN6 198 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 GALR3O60755 368 aaPredicted RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 AVPR2P30518 371 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 EEF1A1P68104 462 aaKnown RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 NFATC3Q12968 1075 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 SRSF5Q13243 272 aaKnown RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 EIF3IQ13347 325 aaKnown RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 ABHD12BQ7Z5M8 362 aaPredicted RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 BPHLQ86WA6 291 aaPredicted RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF101Q8IZC7 436 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 TMEM102Q8N9M5 508 aaPredicted RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 NXPE2Q96DL1 559 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 RBM24Q9BX46 236 aaKnown RBP11.46□□□□□ -0.57
NR4A1-215ENST00000550557 AMBNQ9NP70 447 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 MGAT4BQ9UQ53 548 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 DNAJB5O75953 348 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 ETFAP13804 333 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 CDH11P55287 796 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 KCNAB2Q13303 367 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 CBFBQ13951 182 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 SMCO1Q147U7 214 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 EXT1Q16394 746 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 FBXO42Q6P3S6 717 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 SLC22A16Q86VW1 577 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 KLHL36Q8N4N3 616 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 MED28Q9H204 178 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 ANKRA2Q9H9E1 313 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 EMC3Q9P0I2 261 aa11.46□□□□□ -0.57
NR4A1-215ENST00000550557 OR2T1O43869 369 aa11.46□□□□□ -0.58
NR4A1-215ENST00000550557 ATE1O95260 518 aa11.46□□□□□ -0.58
NR4A1-215ENST00000550557 HCKP08631 526 aa11.46□□□□□ -0.58
NR4A1-215ENST00000550557 UBL4AP11441 157 aa11.46□□□□□ -0.58
NR4A1-215ENST00000550557 KCNAB1Q14722 419 aa11.46□□□□□ -0.58
NR4A1-215ENST00000550557 OR5M10Q6IEU7 315 aa11.46□□□□□ -0.58
NR4A1-215ENST00000550557 RPS19BP1Q86WX3 136 aaKnown RBP11.46□□□□□ -0.58
NR4A1-215ENST00000550557 LILRA3Q8N6C8 439 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms