RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 C12orf71A8MTZ7 269 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 HHLA1C9JL84 531 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 H3BSH0 61 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SOCS2O14508 198 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 HLA-DPB1P04440 258 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 IVDP26440 423 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PSMB5P28074 263 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 FGL1Q08830 312 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 LAPTM4AQ15012 233 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PAPD4Q6PIY7 484 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 MARCH9Q86YJ5 346 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ERI1Q8IV48 349 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR51G2Q8NGK0 314 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR13J1Q8NGT2 312 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 OR2L8Q8NGY9 312 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 ASB11Q8WXH4 323 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PIK3R3Q92569 461 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 DPH2Q9BQC3 489 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM185BQ9H7F4 350 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SRA1Q9HD15 236 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 COMMD3Q9UBI1 195 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 NXT1Q9UKK6 140 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC7A11Q9UPY5 501 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 PEX16Q9Y5Y5 336 aa6.52□□□□□ -1.37
SRGAP1-206ENST00000543397 TRBV11-1A0A0K0K1C0 115 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 BLACEA4D250 179 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 OR6C65A6NJZ3 312 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 H0YGG7 62 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 H3BML4 177 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 NOS1APO75052 506 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 EEDO75530 441 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 SNRNP70P08621 437 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ATXN1LP0C7T5 689 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 IRF2P14316 349 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 DDCP20711 480 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 HIST1H1TP22492 207 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PRKACGP22612 351 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ECI1P42126 302 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC6A8P48029 635 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 LUMP51884 338 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ADARP55265 1226 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 DCDP81605 110 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 MEDAGQ5VYS4 303 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 KIAA1614Q5VZ46 1190 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 BLOC1S3Q6QNY0 202 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ERMP1Q7Z2K6 904 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 UEVLDQ8IX04 471 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 RCBTB1Q8NDN9 531 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 LINC01599Q8WXQ3 324 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 BORCS8Q96FH0 119 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 MND1Q9BWT6 205 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 SOX17Q9H6I2 414 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 DNAJC27Q9NZQ0 273 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 BOKQ9UMX3 212 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 LOC100130705A0A1B0GUX0 176 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF99A8MXY4 864 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 GJB3O75712 270 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 DIRAS3O95661 229 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 HNF1AP20823 631 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 AHRP35869 848 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ADPRHP54922 357 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 INHBCP55103 352 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TLE3Q04726 772 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 GAS6Q14393 721 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 CLCA4Q14CN2 919 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM201Q5SNT2 666 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PRAMEF8Q5VWM4 474 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PRAMEF7Q5VXH5 474 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TRNP1Q6NT89 227 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TPRA1Q86W33 373 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 FRMD1Q8N878 549 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM203Q969S6 136 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF317Q96PQ6 595 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TTYH2Q9BSA4 534 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 SYT11Q9BT88 431 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 C6orf106Q9H6K1 298 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 CHODLQ9H9P2 273 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TEX13CA0A0J9YWL9 993 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TLCD2A6NGC4 264 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 LINC01565O15544 149 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ATE1O95260 518 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 GSTT2BP0CG30 244 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 UGT2B7P16662 529 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 REEP5Q00765 189 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TGFBR3Q03167 851 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 RAB39AQ14964 217 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM52BQ4KMG9 183 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TM4SF20Q53R12 229 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC15A3Q8IY34 581 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 IL17RCQ8NAC3 791 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PGAM5Q96HS1 289 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TXLNGYQ9BZA5 131 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 CDH20Q9HBT6 801 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 WASF3Q9UPY6 502 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 GRIP1Q9Y3R0 1128 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF451Q9Y4E5 1061 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms