RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 MAGEA8P43361 318 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 TMED10P49755 219 aaKnown RBP19.1■□□□□ 0.65
OTUB1-211ENST00000543004 LIPEQ05469 1076 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 GPR68Q15743 365 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.1■□□□□ 0.65
OTUB1-211ENST00000543004 GRAMD1BQ3KR37 738 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 COLEC12Q5KU26 742 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 PRAMEF20Q5VT98 475 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 TYW3Q6IPR3 259 aaKnown RBP19.1■□□□□ 0.65
OTUB1-211ENST00000543004 FRRS1Q6ZNA5 592 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 SERPINA11Q86U17 422 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 ZZZ3Q8IYH5 903 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 RTN4RQ9BZR6 473 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 ZNF350Q9GZX5 532 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 SLC38A1Q9H2H9 487 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 SH2D2AQ9NP31 389 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 A4GALTQ9NPC4 353 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 SPAG4Q9NPE6 437 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 ADA2Q9NZK5 511 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 ABCD2Q9UBJ2 740 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 KCNE5Q9UJ90 142 aa19.1■□□□□ 0.65
OTUB1-211ENST00000543004 C15orf38-AP3S2A0A0A6YYH1 394 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 A0A0G2JMM0 328 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 A0A1W2PPB8 328 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 A0A1W2PRS3 328 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 KIR3DP1A8MWS1 328 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 ABCB7O75027 752 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 SLC25A12O75746 678 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 UTS2O95399 124 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 TXNL4AP83876 142 aaKnown RBP19.09■□□□□ 0.65
OTUB1-211ENST00000543004 C16orf89Q6UX73 402 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 APOOLQ6UXV4 268 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 RTL4Q6ZR62 310 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 NUP54Q7Z3B4 507 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 NET1Q7Z628 596 aaPredicted RBP19.09■□□□□ 0.65
OTUB1-211ENST00000543004 ARPINQ7Z6K5 226 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 ZADH2Q8N4Q0 377 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 TRNT1Q96Q11 434 aaKnown RBP19.09■□□□□ 0.65
OTUB1-211ENST00000543004 CDRT15Q96T59 188 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 G6PC3Q9BUM1 346 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 MRTO4Q9UKD2 239 aaKnown RBP19.09■□□□□ 0.65
OTUB1-211ENST00000543004 LIPT1Q9Y234 373 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 WDR45Q9Y484 360 aa19.09■□□□□ 0.65
OTUB1-211ENST00000543004 C2orf72A6NCS6 295 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 PRORSD1PA6NEY8 169 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 EBAG9O00559 213 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 STX11O75558 287 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 SOX30O94993 753 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 ATP6V1C1P21283 382 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 PSMD4P55036 377 aaKnown RBP19.08■□□□□ 0.65
OTUB1-211ENST00000543004 PSPHP78330 225 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 CDK6Q00534 326 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 GABPB1Q06547 395 aaPredicted RBP19.08■□□□□ 0.65
OTUB1-211ENST00000543004 SCARB2Q14108 478 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 FLYWCH1Q4VC44 716 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 LACTB2Q53H82 288 aaPredicted RBP19.08■□□□□ 0.65
OTUB1-211ENST00000543004 FAM156AQ8NDB6 213 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 PSD4Q8NDX1 1056 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 SPPL2AQ8TCT8 520 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 GRHL3Q8TE85 626 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 PAQR8Q8TEZ7 354 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 TREX2Q9BQ50 279 aaPredicted RBP19.08■□□□□ 0.65
OTUB1-211ENST00000543004 ADNPQ9H2P0 1102 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 TMEM38AQ9H6F2 299 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 PROK2Q9HC23 129 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 GALNT9Q9HCQ5 603 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 DEPPQ9NTK1 212 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 TUBD1Q9UJT1 453 aa19.08■□□□□ 0.65
OTUB1-211ENST00000543004 CNOT11Q9UKZ1 510 aaKnown RBP19.08■□□□□ 0.65
OTUB1-211ENST00000543004 AK1P00568 194 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 AQP1P29972 269 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 MSX2P35548 267 aaPredicted RBP19.07■□□□□ 0.64
OTUB1-211ENST00000543004 GSK3BP49841 420 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 GPR85P60893 370 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 MAPK14Q16539 360 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 SLC22A10Q63ZE4 541 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 GPALPP1Q8IXQ4 340 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 SLC39A7Q92504 469 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 TM9SF4Q92544 642 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 SGCZQ96LD1 299 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 ALG2Q9H553 416 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 PCNX3Q9H6A9 2034 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 THUMPD1Q9NXG2 353 aaKnown RBP19.07■□□□□ 0.64
OTUB1-211ENST00000543004 LUZP4Q9P127 313 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 PCDHGB7Q9Y5F8 929 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 ERVH48-1M5A8F1 160 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 ADAM10O14672 748 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 TP53I11O14683 189 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 FADS1O60427 444 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 SORBS2O94875 1100 aaKnown RBP19.07■□□□□ 0.64
OTUB1-211ENST00000543004 SP1P08047 785 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 DCTP40126 519 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 PTGDSP41222 190 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 CASP3P42574 277 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 EFR3AQ14156 821 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 INPP5JQ15735 1006 aaPredicted RBP19.07■□□□□ 0.64
OTUB1-211ENST00000543004 VMACQ2NL98 169 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 NADK2Q4G0N4 442 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 LRRC74BQ6ZQY2 392 aa19.07■□□□□ 0.64
OTUB1-211ENST00000543004 DND1Q8IYX4 353 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms