RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SLC47A1Q96FL8 570 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 HSH2DQ96JZ2 352 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 SDF2Q99470 211 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 SEPHS2Q99611 448 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 QRSL1Q9H0R6 528 aaKnown RBP13.07□□□□□ -0.32
CD4-208ENST00000538827 SLC38A1Q9H2H9 487 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 FBXO34Q9NWN3 711 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 SEC14L3Q9UDX4 400 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 MKLN1Q9UL63 735 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 PPIEQ9UNP9 301 aaKnown RBP13.07□□□□□ -0.32
CD4-208ENST00000538827 PIEZO2Q9H5I5 2752 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 USP9XQ93008 2570 aaPredicted RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 M0QX08 132 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 WWP2O00308 870 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 RRP8O43159 456 aaKnown RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 KIAA0513O60268 411 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 PRKD3O94806 890 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 IGKV1D-16P01601 117 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 DRD5P21918 477 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 PIGAP37287 484 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 RNF144AP50876 292 aaPredicted RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 NRG3P56975 720 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 RCN1Q15293 331 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 FLYWCH1Q4VC44 716 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 TBCELQ5QJ74 424 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 TYW3Q6IPR3 259 aaKnown RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 C16orf47Q6ZP98 133 aaPredicted RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 FKBP9P1Q75LS8 142 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 ZAR1Q86SH2 424 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 ADGRG5Q8IZF4 528 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 EID3Q8N140 333 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 FAM86B1Q8N7N1 296 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 NUBPLQ8TB37 319 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 SPPL2AQ8TCT8 520 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 KCNE4Q8WWG9 221 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 TMBIM1Q969X1 311 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 OMA1Q96E52 524 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 IMMP1LQ96LU5 166 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 SPATA5L1Q9BVQ7 753 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 BCL2L10Q9HD36 194 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 DCAF13Q9NV06 445 aaKnown RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 MRTO4Q9UKD2 239 aaKnown RBP13.06□□□□□ -0.32
CD4-208ENST00000538827 ZNF451Q9Y4E5 1061 aa13.06□□□□□ -0.32
CD4-208ENST00000538827 A0A1W2PQ72 361 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ACOX3O15254 700 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 SUV39H1O43463 412 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 TPST1O60507 370 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 FCMRO60667 390 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 FKBP6O75344 327 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 GCM2O75603 506 aaPredicted RBP13.05□□□□□ -0.32
CD4-208ENST00000538827 REM1O75628 298 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 SERPINB7O75635 380 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 SOX30O94993 753 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 GPIP06744 558 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ITGAMP11215 1152 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ITPKBP27987 946 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 DCTP40126 519 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 EIF2S3P41091 472 aaKnown RBP13.05□□□□□ -0.32
CD4-208ENST00000538827 RHDQ02161 417 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 CHRNB3Q05901 458 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 CYP27C1Q4G0S4 372 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 FAM98BQ52LJ0 330 aaKnown RBP13.05□□□□□ -0.32
CD4-208ENST00000538827 CRB2Q5IJ48 1285 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 FCRLBQ6BAA4 426 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 TCTN3Q6NUS6 607 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 EIF3MQ7L2H7 374 aaKnown RBP13.05□□□□□ -0.32
CD4-208ENST00000538827 VTCN1Q7Z7D3 282 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 PEX5LQ8IYB4 626 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 TAGAPQ8N103 731 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ZNF441Q8N8Z8 693 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 OR8K3Q8NH51 312 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 OR52P1PQ8NH57 321 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 FAM110BQ8TC76 370 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 SLC22A8Q8TCC7 542 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ELP5Q8TE02 316 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ADAMTS17Q8TE56 1095 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 CANT1Q8WVQ1 401 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 LZICQ8WZA0 190 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 HSPBAP1Q96EW2 488 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 WBP1Q96G27 269 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 G6PC3Q9BUM1 346 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 UGT2B28Q9BY64 529 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 S100A14Q9HCY8 104 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 MMP25Q9NPA2 562 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 POLE3Q9NRF9 147 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 OLAHQ9NV23 265 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 SLC13A4Q9UKG4 626 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
CD4-208ENST00000538827 GPC6Q9Y625 555 aaPredicted RBP13.05□□□□□ -0.32
CD4-208ENST00000538827 DSPPQ9NZW4 1301 aa13.05□□□□□ -0.32
CD4-208ENST00000538827 CENPVL1A0A0U1RR11 272 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 HS6ST1O60243 411 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms