RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ACAD8Q9UKU7 415 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 PCDHGA2Q9Y5H1 932 aa5.39□□□□□ -1.55
CSMD1-215ENST00000537824 DIRAS3O95661 229 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 KNG1P01042 644 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HLA-DMAP28067 261 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 BDKRB1P46663 353 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CDKN2DP55273 166 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 OXA1LQ15070 435 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZMAT1Q5H9K5 638 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SLC8B1Q6J4K2 584 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SLC51BQ86UW2 128 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FBXO15Q8NCQ5 510 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 OR51A7Q8NH64 312 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 THRSPQ92748 146 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 GLYATL1Q969I3 302 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 BORCS7Q96B45 105 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SLC30A3Q99726 388 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 DERL2Q9GZP9 239 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 NDRG3Q9UGV2 375 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CEMIPQ8WUJ3 1361 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 DDTLA6NHG4 134 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ARHGAP33O14559 1287 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FZD7O75084 574 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ASPAP45381 313 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 GCGRP47871 477 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RPS25P62851 125 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PRAMEF14Q5SWL7 426 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF678Q5SXM1 525 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF680Q8NEM1 530 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CA5BP1Q8WTZ4 195 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SPHK1Q9NYA1 384 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 KANSL3Q9P2N6 904 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PCDHB11Q9Y5F2 797 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HOXA2O43364 376 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 BRINP1O60477 761 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF44P15621 663 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TNFRSF1BP20333 461 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 GCAP28676 217 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 BMP8BP34820 402 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MASP1P48740 699 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RPS13P62277 151 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 BMP8AQ7Z5Y6 402 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LYSMD2Q8IV50 215 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LRRC52Q8N7C0 313 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SPOCK3Q9BQ16 436 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 OR51B5Q9H339 312 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 KCNK13Q9HB14 408 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RBFOX1Q9NWB1 397 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CYB5R1Q9UHQ9 305 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 D6RAR5 112 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LGALS2P05162 132 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HEXBP07686 556 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 AANATQ16613 207 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 OTOP2Q7RTS6 562 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TECPR1Q7Z6L1 1165 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF527Q8NB42 609 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LCN9Q8WX39 176 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PTCHD1Q96NR3 888 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 DEFB129Q9H1M3 183 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ERVW-1Q9UQF0 538 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3BA6NDS4 549 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CLDN11O75508 207 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ATG12O94817 140 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 HNF1AP20823 631 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 GRIK2Q13002 908 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CGB2Q6NT52 195 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MBOAT1Q6ZNC8 495 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 VSIG10LQ86VR7 867 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SLC35F3Q8IY50 421 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RPL10LQ96L21 214 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 PHRF1Q9P1Y6 1649 aaKnown RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 POM121BA6NF01 834 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CDK14O94921 469 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 F10P00742 488 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 C1QBP02746 253 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FBXO45P0C2W1 286 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 NDUFV1P49821 464 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 AKR1C2P52895 323 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 AKR1C1Q04828 323 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ARHGAP1Q07960 439 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MEF2DQ14814 521 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 RPE65Q16518 533 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FAM199XQ6PEV8 388 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MON1AQ86VX9 555 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 NUDT13Q86X67 352 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 MOAP1Q96BY2 351 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FN3KRPQ9HA64 309 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 IL20RAQ9UHF4 553 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 SPATA31C2B4DYI2 1134 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 S100A11P31949 105 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 KCNJ5P48544 419 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 FAM189BP81408 668 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 TAF10Q12962 218 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 CHST9Q7L1S5 443 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LYSMD3Q7Z3D4 306 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LRRC28Q86X40 367 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-215ENST00000537824 ZFPM1Q8IX07 1006 aa5.38□□□□□ -1.55
CSMD1-215ENST00000537824 LGALS14Q8TCE9 139 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms