RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 PMS2P3Q13401 168 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 C1orf61Q13536 156 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 SF3B4Q15427 424 aaKnown RBP eCLIP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 ZNF124Q15973 351 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 VMACQ2NL98 169 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 ZNF284Q2VY69 593 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 C18orf21Q32NC0 220 aaPredicted RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 VPS26BQ4G0F5 336 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PLPP4Q5VZY2 271 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 TYW3Q6IPR3 259 aaKnown RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 UNQ6126/PRO20091Q6UXV3 157 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 SLC16A12Q6ZSM3 486 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 MRPL21Q7Z2W9 205 aaKnown RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 MRGPREQ86SM8 312 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 RANBP3LQ86VV4 465 aaPredicted RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 CATSPERDQ86XM0 798 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 ERI1Q8IV48 349 aaKnown RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 CMTM8Q8IZV2 173 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 LINC00518Q8N0U6 118 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 EID3Q8N140 333 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 CLIP4Q8N3C7 705 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 RELL2Q8NC24 303 aaPredicted RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 TMEM255BQ8WV15 326 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PIH1D2Q8WWB5 315 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PIK3R3Q92569 461 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 C8orf44Q96CB5 159 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 NXPE2Q96DL1 559 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 TIMD4Q96H15 378 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 C10orf90Q96M02 699 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 P2RY13Q9BPV8 354 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 DCTN5Q9BTE1 182 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 NXF5Q9H1B4 397 aaKnown RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 OPN3Q9H1Y3 402 aaPredicted RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 MAP6D1Q9H9H5 199 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 S100A14Q9HCY8 104 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 A4GALTQ9NPC4 353 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 MS4A12Q9NXJ0 267 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 FAM53CQ9NYF3 392 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 RBAKQ9NYW8 714 aaPredicted RBP4.09□□□□□ -1.75
C11orf54-213ENST00000533585 ADA2Q9NZK5 511 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PPP4R1LQ9P1A2 415 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 CYTH4Q9UIA0 394 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 ZDHHC2Q9UIJ5 367 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PACSIN3Q9UKS6 424 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PSMD13Q9UNM6 376 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 PCDHAC2Q9Y5I4 1007 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 RAI2Q9Y5P3 530 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 AFF2P51816 1311 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 ATP10AO60312 1499 aa4.09□□□□□ -1.75
C11orf54-213ENST00000533585 TRBV5-3A0A0A0MS03 114 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 GRID2IPA4D2P6 1211 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 CCT8L1PA6NM43 557 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 SRRM4A7MD48 611 aaKnown RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 ETV2O00321 342 aaPredicted RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 SRPX2O60687 465 aaPredicted RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 RFPL2O75678 378 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 DIRAS1O95057 198 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 OAZ2O95190 189 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 FGF2P09038 288 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 NAGAP17050 411 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 PGCP20142 388 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 GNLYP22749 145 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 GLRA1P23415 457 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 HMGB2P26583 209 aaKnown RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 EVI2BP34910 448 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 POU3F4P49335 361 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 DUSP3P51452 185 aaPredicted RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 CLDN18P56856 261 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 RAB10P61026 200 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 TSPAN5P62079 268 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 BLOC1S1P78537 153 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 NHLH1Q02575 133 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 LGALS3BPQ08380 585 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 MFAP5Q13361 173 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 ART3Q13508 389 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 PIGHQ14442 188 aaPredicted RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 ATXN7L3Q14CW9 347 aaPredicted RBP4.08□□□□□ -1.76
C11orf54-213ENST00000533585 PON2Q15165 354 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 CYTH1Q15438 398 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 BCL2A1Q16548 175 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 MLANAQ16655 118 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 PTPN20Q4JDL3 420 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 NT5DC1Q5TFE4 455 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 ASPHD1Q5U4P2 390 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 C1orf189Q5VU69 101 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 OR4C11Q6IEV9 310 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 STEAP1BQ6NZ63 245 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 C1orf94Q6P1W5 598 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 SCYL2Q6P3W7 929 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 RAD9BQ6WBX8 426 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 Q6ZRG5 221 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 LANCL3Q6ZV70 420 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 TTLL10Q6ZVT0 673 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 SLC26A9Q7LBE3 791 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 KCNMB4Q86W47 210 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 TRIM69Q86WT6 500 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 MARCH9Q86YJ5 346 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 C1QL4Q86Z23 238 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 ARHGAP18Q8N392 663 aa4.08□□□□□ -1.76
C11orf54-213ENST00000533585 ZNF781Q8N8C0 355 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms