RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SLC16A11	Q8NCK7	471 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	NAXE	Q8NCW5	288 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR2M3	Q8NG83	312 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR4K17	Q8NGC6	315 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	PSMA8	Q8TAA3	256 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	MGARP	Q8TDB4	240 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR5P2	Q8WZ92	322 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	SLC9A6	Q92581	669 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	TLCD1	Q96CP7	247 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	C16orf58	Q96GQ5	468 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	SPOCK3	Q9BQ16	436 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	TREX2	Q9BQ50	279 aa	Predicted RBP	10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	YIPF4	Q9BSR8	244 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	NUF2	Q9BZD4	464 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	ENKD1	Q9H0I2	346 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	CXorf36	Q9H7Y0	433 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	C3orf14	Q9HBI5	128 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	TMBIM4	Q9HC24	238 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	KCNJ16	Q9NPI9	418 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	ATAD3A	Q9NVI7	634 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	PNPO	Q9NVS9	261 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	NOP53	Q9NZM5	478 aa	Known RBP	10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	PPP4R1L	Q9P1A2	415 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	DKKL1	Q9UK85	242 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	MRTO4	Q9UKD2	239 aa	Known RBP	10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	CAMK2A	Q9UQM7	478 aa		10.68	□□□□□ -0.7
PSMC3-205	ENST00000528362	LRBA	P50851	2863 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	DCHS2	Q6V1P9	2916 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	ABCA12	Q86UK0	2595 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	FAM47E-STBD1	D6RA91	191 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZIC3	O60481	467 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	SNN	O75324	88 aa	Predicted RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	KCNK2	O95069	426 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	KCNH1	O95259	989 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	HMGN2	P05204	90 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	ALOX5	P09917	674 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	CPN1	P15169	458 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	TCEA1	P23193	301 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	DPP4	P27487	766 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	MSX1	P28360	303 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	CEACAM8	P31997	349 aa	Predicted RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	GCK	P35557	465 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZFP36L2	P47974	494 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	LHX2	P50458	406 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	PSMD4	P55036	377 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	CLDN8	P56748	225 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	B3GALT5-AS1	P59052	145 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	PRR5	P85299	388 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	LASP1	Q14847	261 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	GRAMD1B	Q3KR37	738 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	NSUN5P2	Q63ZY6	315 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	MARCH3	Q86UD3	253 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	IFNE	Q86WN2	208 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	LACC1	Q8IV20	430 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	TRIM42	Q8IWZ5	723 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	KIRREL3	Q8IZU9	778 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	NATD1	Q8N6N6	113 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	TNIP2	Q8NFZ5	429 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	FAM110B	Q8TC76	370 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	PRPF18	Q99633	342 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	DSN1	Q9H410	356 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	RUBCNL	Q9H714	662 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	MEAF6	Q9HAF1	191 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	MED11	Q9P086	117 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	SNX8	Q9Y5X2	465 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	DNAJC13	O75165	2243 aa		10.67	□□□□□ -0.7
PSMC3-205	ENST00000528362	GTF3C1	Q12789	2109 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	IGLV3-32	A0A0A0MS00	114 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	CD8B2	A6NJW9	211 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	HSPB2	A8KAH6	182 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	OXSR1	O95747	527 aa	Predicted RBP	10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	NGFR	P08138	427 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	TIMP3	P35625	211 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	CCT3	P49368	545 aa	Known RBP	10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	PRIM2	P49643	509 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	STAR	P49675	285 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	SLC18A1	P54219	525 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	DSCR4	P56555	118 aa	Predicted RBP	10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	HBA1	P69905	142 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	CASP8	Q14790	479 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	HSPB2	Q16082	182 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	SLC25A35	Q3KQZ1	300 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	CCNJ	Q5T5M9	372 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZCCHC12	Q6PEW1	402 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	FIGNL1	Q6PIW4	674 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	ENPP6	Q6UWR7	440 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	MEX3B	Q6ZN04	569 aa	Known RBP	10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	GDF7	Q7Z4P5	450 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	COX18	Q8N8Q8	333 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR56A1	Q8NGH5	318 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	OR4C3	Q8NH37	302 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	ZPLD1	Q8TCW7	415 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	DUSP19	Q8WTR2	217 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	JADE3	Q92613	823 aa		10.66	□□□□□ -0.7
PSMC3-205	ENST00000528362	CDS1	Q92903	461 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms