RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 DPP4P27487 766 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 SRD5A2P31213 254 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 MAP3K8P41279 467 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 PSMD4P55036 377 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 CLDN8P56748 225 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 MAD2L1Q13257 205 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 MLC1Q15049 377 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 DUSP5Q16690 384 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 GRAMD1BQ3KR37 738 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 SPDYE7PQ495Y7 208 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 NHSL2Q5HYW2 709 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 CCNJQ5T5M9 372 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 MFSD12Q6NUT3 480 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 MEX3BQ6ZN04 569 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 ZAR1Q86SH2 424 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 IFNEQ86WN2 208 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 PM20D2Q8IYS1 436 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 TNIP2Q8NFZ5 429 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 OR2M3Q8NG83 312 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 OR5P2Q8WZ92 322 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 HOXB13Q92826 284 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 COQ8BQ96D53 544 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 MS4A4EQ96PG1 132 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 TRIB1Q96RU8 372 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 PRPF18Q99633 342 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 DUSP26Q9BV47 211 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 PRDM14Q9GZV8 571 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 RUBCNLQ9H714 662 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 CXorf36Q9H7Y0 433 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 SDHAF3Q9NRP4 125 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 ATAD3AQ9NVI7 634 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 PCDHGB3Q9Y5G1 929 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 KIAA1549Q9HCM3 1950 aa11.67□□□□□ -0.54
TRAPPC4-205ENST00000525079 NAV2Q8IVL1 2488 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CACNA1CQ13936 2221 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 TTC36A6NLP5 189 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 ZIC3O60481 467 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 KCNK2O95069 426 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 EPPINO95925 133 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 ACTL6AO96019 429 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 HMGN2P05204 90 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 KITP10721 976 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 PTGER4P35408 488 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 GCKP35557 465 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CCT3P49368 545 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 PRIM2P49643 509 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CLK3P49761 638 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 PRR5P85299 388 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 TP53BP2Q13625 1128 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CASP8Q14790 479 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 LASP1Q14847 261 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 LSM12Q3MHD2 195 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 RIPPLY2Q5TAB7 128 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 OR4F3Q6IEY1 312 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 PLXDC2Q6UX71 529 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 APOOLQ6UXV4 268 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CLECL1Q8IZS7 167 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CLEC4FQ8N1N0 589 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 COX18Q8N8Q8 333 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 GATSQ8NAP1 163 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 NAXEQ8NCW5 288 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 OR5M1Q8NGP8 315 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 OR4C3Q8NH37 302 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 OR5AK3PQ8NH89 298 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 CDS1Q92903 461 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 TLCD1Q96CP7 247 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 SFXN2Q96NB2 322 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 TBL1XR1Q9BZK7 514 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 BHLHE41Q9C0J9 482 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 NPDC1Q9NQX5 325 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 FAM120CQ9NX05 1096 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 ASIC5Q9NY37 505 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 HAO1Q9UJM8 370 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 ABCG2Q9UNQ0 655 aa11.66□□□□□ -0.54
TRAPPC4-205ENST00000525079 HCFC1P51610 2035 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 H0Y3Z8 333 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 SNUPNO95149 360 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 ANGPTL1O95841 491 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 LBPP18428 481 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 HK1P19367 917 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 SOAT1P35610 550 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 AGFG1P52594 562 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 GFRA1P56159 465 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 DSCR4P56555 118 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 NME5P56597 212 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 POU6F2P78424 691 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 TFF3Q07654 80 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 SMU1Q2TAY7 513 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 ZCCHC12Q6PEW1 402 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 ENPP6Q6UWR7 440 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 LACC1Q8IV20 430 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 FADS6Q8N9I5 356 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 FAM110BQ8TC76 370 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 TUBA1CQ9BQE3 449 aa11.65□□□□□ -0.54
TRAPPC4-205ENST00000525079 TRIM8Q9BZR9 551 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms