RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RPL4P36578 427 aaKnown RBP4.29□□□□□ -1.72
PTPN12-213ENST00000519553 RIPPLY3P57055 190 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 DPYSL3Q14195 570 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 CYP51A1Q16850 503 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 SBK1Q52WX2 424 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 ARNTL2Q8WYA1 636 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 TADA1Q96BN2 335 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 B3GALT6Q96L58 329 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 TSSK1BQ9BXA7 367 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 ZNF702PQ9H963 129 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 FLVCR1Q9Y5Y0 555 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 ABCC4O15439 1325 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 ZSCAN5BA6NJL1 495 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 ANXA4P09525 319 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-213ENST00000519553 IL10P22301 178 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 SPP2Q13103 211 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 PRR4Q16378 134 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 TMEM52BQ4KMG9 183 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 TMEM184AQ6ZMB5 413 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 CEND1Q8N111 149 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 CERS5Q8N5B7 392 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 CSNK1A1LQ8N752 337 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 BCORP1Q8N888 145 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 ARL10Q8N8L6 244 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 OR8H1Q8NGG4 311 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 FCGR1BQ92637 280 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 FAM122AQ96E09 287 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 NUS1Q96E22 293 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 ZIM3Q96PE6 472 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 FAM111AQ96PZ2 611 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 RAB17Q9H0T7 212 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 ACTR8Q9H981 624 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 ANAPC11Q9NYG5 84 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 GALPQ9UBC7 116 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 FOXJ3Q9UPW0 622 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 L3MBTL1Q9Y468 752 aa4.28□□□□□ -1.72
PTPN12-213ENST00000519553 GPRASP1Q5JY77 1395 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 LYPD3O95274 346 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 APBB3O95704 486 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 GAP43P17677 238 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 EXOSC2Q13868 293 aaKnown RBP4.27□□□□□ -1.73
PTPN12-213ENST00000519553 DPYSQ14117 519 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 CEBPEQ15744 281 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 PAGE2BQ5JRK9 111 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 FAM120AOSQ5T036 256 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 ZNF658Q5TYW1 1059 aaPredicted RBP4.27□□□□□ -1.73
PTPN12-213ENST00000519553 IRGCQ6NXR0 463 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 ZCCHC12Q6PEW1 402 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 LPCAT2Q7L5N7 544 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 BPIFB2Q8N4F0 458 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 PHYHIPLQ96FC7 376 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 TMEM80Q96HE8 168 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 TMEM121Q9BTD3 319 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 RPAP3Q9H6T3 665 aaPredicted RBP4.27□□□□□ -1.73
PTPN12-213ENST00000519553 YAE1D1Q9NRH1 226 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 PNO1Q9NRX1 252 aaKnown RBP4.27□□□□□ -1.73
PTPN12-213ENST00000519553 C1orf123Q9NWV4 160 aa4.27□□□□□ -1.73
PTPN12-213ENST00000519553 KRT87PA6NCN2 255 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 LRRC30A6NM36 301 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 SERF1AO75920 110 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 PTBP3O95758 552 aaKnown RBP4.26□□□□□ -1.73
PTPN12-213ENST00000519553 PGK1P00558 417 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 IGHV3-23P01764 117 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 CDH5P33151 784 aaPredicted RBP4.26□□□□□ -1.73
PTPN12-213ENST00000519553 NF2P35240 595 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 EMDP50402 254 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 P2RY4P51582 365 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 RFTN1Q14699 578 aaPredicted RBP4.26□□□□□ -1.73
PTPN12-213ENST00000519553 RBM43Q6ZSC3 357 aaKnown RBP4.26□□□□□ -1.73
PTPN12-213ENST00000519553 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 ANKRD20A12PQ8NF67 263 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 LINC01006Q8NI28 216 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 GLT8D2Q9H1C3 349 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 PLSCR3Q9NRY6 295 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 EIF3LQ9Y262 564 aaKnown RBP4.26□□□□□ -1.73
PTPN12-213ENST00000519553 PARD3Q8TEW0 1356 aa4.26□□□□□ -1.73
PTPN12-213ENST00000519553 FAM230AA0A1W2PPH8 454 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 SAGE2PA6NJ88 616 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 RASGRF2O14827 1237 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 CASKO14936 926 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 HSPB1P04792 205 aaKnown RBP4.25□□□□□ -1.73
PTPN12-213ENST00000519553 CD55P08174 381 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 GSTT2P0CG29 244 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 GSTT2BP0CG30 244 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 RRASP10301 218 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 XRCC1P18887 633 aaPredicted RBP4.25□□□□□ -1.73
PTPN12-213ENST00000519553 CCNA2P20248 432 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 LIM2P55344 173 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 RND3P61587 244 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 OVGP1Q12889 678 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 ZNF154Q13106 437 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 ADPRMQ3LIE5 342 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 PARP10Q53GL7 1025 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 RAET1GQ6H3X3 334 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 HSD11B1LQ7Z5J1 315 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 EFCAB13Q8IY85 973 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 PRR22Q8IZ63 422 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 Q8N7P7 452 aa4.25□□□□□ -1.73
PTPN12-213ENST00000519553 CNNM3Q8NE01 707 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms