RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SOX3P41225 446 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 LSSP48449 732 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 KHKP50053 298 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 NCBP2P52298 156 aaKnown RBP eCLIP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 ARFIP1P53367 373 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 WNT4P56705 351 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 RPS15AP62244 130 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 UBE2IP63279 158 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 BTN3A2P78410 334 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 EFNB1P98172 346 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 CDK5Q00535 292 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 DUSP2Q05923 314 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TPBGQ13641 420 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 GINS1Q14691 196 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SF3B4Q15427 424 aaKnown RBP eCLIP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 CARTPTQ16568 116 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 RPS26P11Q5JNZ5 115 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 FCRL6Q6DN72 434 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM64Q6YI46 380 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 PARGQ86W56 976 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC7A13Q8TCU3 470 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SFXN5Q8TD22 340 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 GPR151Q8TDV0 419 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 RAB8BQ92930 207 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 CNRIP1Q96F85 164 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 OTUB1Q96FW1 271 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC35G5Q96KT7 338 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 PRRC1Q96M27 445 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 OR2A5Q96R48 311 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TREX2Q9BQ50 279 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 BARHL1Q9BZE3 327 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TWSG1Q9GZX9 223 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TP63Q9H3D4 680 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SERHL2Q9H4I8 314 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 POT1Q9NUX5 634 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 C14orf119Q9NWQ9 140 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TVP23BQ9NYZ1 205 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 LOC105369274A0A096LPK9 316 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 LOC102723532A0A0G2JNH3 316 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A0G2JPF8 293 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 FABP12A6NFH5 140 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 FAM170BA6NMN3 283 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 HNRNPCL2B2RXH8 293 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 B4DGG1 531 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 HNRNPCL3B7ZW38 293 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 PRODHO43272 600 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 TLX2O43763 284 aaPredicted RBP10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 CDRT1O95170 752 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC35G6P0C7Q6 338 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 HNRNPCL4P0DMR1 293 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 NR2F1P10589 423 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 ACP2P11117 423 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 CTSEP14091 401 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 TNNI3P19429 210 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 FGF9P31371 208 aaPredicted RBP10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 STXBP1P61764 594 aaKnown RBP10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 IFITM2Q01629 132 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 GLYR1Q49A26 553 aaPredicted RBP10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 ZFP69Q49AA0 526 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 PDZK1Q5T2W1 519 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 PODNL1Q6PEZ8 512 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC36A4Q6YBV0 504 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 MRGPREQ86SM8 312 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 ASPGQ86U10 573 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 OR4N4Q8N0Y3 316 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 SHISA5Q8N114 240 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 SIMC1Q8NDZ2 872 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 OR52I1Q8NGK6 324 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 OR5D16Q8NGK9 328 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 VANGL1Q8TAA9 524 aaPredicted RBP10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 SUN3Q8TAQ9 357 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 ZCCHC10Q8TBK6 192 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 GNPDA2Q8TDQ7 276 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 KLHDC7BQ96G42 594 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC38A2Q96QD8 506 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 NELL2Q99435 816 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 LRRC61Q9BV99 259 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 MIR1-1HGQ9H1L0 117 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 ANKRD19PQ9H560 264 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 ANKRA2Q9H9E1 313 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 HRASLS2Q9NWW9 162 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 N6AMT1Q9Y5N5 214 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 CCDC88CQ9P219 2028 aa10.3□□□□□ -0.76
SH3RF1-203ENST00000508685 CCDC182A6NF36 153 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SYT5O00445 386 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 PROM1O43490 865 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 HCN1O60741 890 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF217O75362 1048 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SOX14O95416 240 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 WNT1P04628 370 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 TP53P04637 393 aaPredicted RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 CFL1P23528 166 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 SDC2P34741 201 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 GPC1P35052 558 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 FEN1P39748 380 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 NR4A2P43354 598 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 HHEXQ03014 270 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 GPR19Q15760 415 aa10.29□□□□□ -0.76
SH3RF1-203ENST00000508685 DEFB134Q4QY38 66 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms