RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SDC4P31431 198 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SMSP52788 366 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 KLF3P57682 345 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 ZP1P60852 638 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 TIMM10P62072 90 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 EIF5AP63241 154 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 FAM189BP81408 668 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 ITKQ08881 620 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SRSF5Q13243 272 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 TRA2AQ13595 282 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 CDH18Q13634 790 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 GPR176Q14439 515 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SLBPQ14493 270 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 GSG1Q2KHT4 349 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 FAM83EQ2M2I3 478 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 CRTC2Q53ET0 693 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 CBWD3Q5JTY5 395 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 PCID2Q5JVF3 399 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 CBWD5Q5RIA9 395 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 STRIP1Q5VSL9 837 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 KIAA0319Q5VV43 1072 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC39A5Q6ZMH5 540 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 TMUB2Q71RG4 321 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 MMP21Q8N119 569 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 C19orf47Q8N9M1 422 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 FAM71CQ8NEG0 241 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 RDM1Q8NG50 284 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 TERB2Q8NHR7 220 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC35F5Q8WV83 523 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 APH1BQ8WW43 257 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 WFDC12Q8WWY7 111 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 GJA10Q969M2 543 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 MGME1Q9BQP7 344 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 GINS4Q9BRT9 223 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 COMMD4Q9H0A8 199 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 TMEM248Q9NWD8 314 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 PLEKHB1Q9UF11 243 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 PKP3Q9Y446 797 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 LRRN3E7EW58 273 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SH3BGRLO75368 114 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ATP6AP2O75787 350 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SCG5P05408 212 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 MELTFP08582 738 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CD58P19256 250 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 TPSB2P20231 275 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 HOXC8P31273 242 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 BTCP35070 178 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 GLP1RP43220 463 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 NPBWR1P48145 328 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CDC34P49427 236 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 DNAJB13P59910 316 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SEC61A1P61619 476 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 MRPL49Q13405 166 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ODF1Q14990 250 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 TPSAB1Q15661 275 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 GOLGA7BQ2TAP0 167 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 MESTQ5EB52 335 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 OR52W1Q6IF63 320 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 FAHD2BQ6P2I3 314 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 TSSK4Q6SA08 328 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 PTOV1Q86YD1 416 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ZNF444Q8N0Y2 327 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 GPR26Q8NDV2 337 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CPT1CQ8TCG5 803 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 POF1BQ8WVV4 589 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SEPT5Q99719 369 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SMOQ99835 787 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 LRRN3Q9H3W5 708 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 NMRAL1Q9HBL8 299 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 TMEM184CQ9NVA4 438 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC25A13Q9UJS0 675 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CITO14578 2027 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 OR2M5A3KFT3 312 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 GSG1L2A8MUP6 293 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ISM1B1AKI9 464 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 GTPBP1O00178 669 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CASKO14936 926 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 OR10H3O60404 316 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ONECUT2O95948 504 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SNRNP70P08621 437 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 BCKDHBP21953 392 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 MPGP29372 298 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC11A1P49279 550 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 INPP1P49441 399 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 GPR15P49685 360 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 DLK1P80370 383 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 CHIT1Q13231 466 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 VEZF1Q14119 521 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 RFTN2Q52LD8 501 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ZRANB3Q5FWF4 1079 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 NKAPLQ5M9Q1 402 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 NCMAPQ5T1S8 102 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 RNLSQ5VYX0 342 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 ZNF551Q7Z340 670 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 UBE3DQ7Z6J8 389 aa10.16□□□□□ -0.78
PDLIM5-210ENST00000508216 OR8J3Q8NGG0 315 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms