RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 FRRS1Q6ZNA5 592 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 CALHM3Q86XJ0 350 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 DND1Q8IYX4 353 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF619Q8N2I2 560 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 BBS10Q8TAM1 723 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 SLC38A5Q8WUX1 472 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 CCDC124Q96CT7 223 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 TRNT1Q96Q11 434 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 CDRT15Q96T59 188 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 SDF2Q99470 211 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 SMAD5Q99717 465 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 BTBD10Q9BSF8 475 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 C1orf21Q9H246 121 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 TMEM38AQ9H6F2 299 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 CACYBPQ9HB71 228 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 CALML5Q9NZT1 146 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 FLRT3Q9NZU0 649 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 TMEM181Q9P2C4 612 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 MKLN1Q9UL63 735 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 TP53TG5Q9Y2B4 290 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF451Q9Y4E5 1061 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 ELOVL7A1L3X0 281 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 PRAMEF25A6NGN4 478 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 TP53I11O14683 189 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 GSTA4O15217 222 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 SCO2O43819 266 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 DNAJA2O60884 412 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 SLC25A12O75746 678 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 ZIC2O95409 532 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 PDGFAP04085 211 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 CCL3P10147 92 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 HPGDP15428 266 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 CD96P40200 585 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 GZMMP51124 257 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 RHDQ02161 417 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 CHRNEQ04844 493 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 RBBP4Q09028 425 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 ADRM1Q16186 407 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 ZSCAN26Q16670 478 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 GRAMD1BQ3KR37 738 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 LRRC23Q53EV4 343 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 HIPK4Q8NE63 616 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 C9orf43Q8TAL5 461 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 HGDQ93099 445 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 C5orf34Q96MH7 638 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF583Q96ND8 569 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 SIGLEC12Q96PQ1 595 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 TREX2Q9BQ50 279 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 THTPAQ9BU02 230 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
CPNE1-227ENST00000498056 SLC38A1Q9H2H9 487 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 LRMDAQ9H2I8 198 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 POLE3Q9NRF9 147 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 CSAG2Q9Y5P2 127 aa12.47□□□□□ -0.41
CPNE1-227ENST00000498056 CENPVL1A0A0U1RR11 272 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 G3V3Y1 287 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 SCDO00767 359 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 FCMRO60667 390 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 DNAJC8O75937 253 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-227ENST00000498056 OXSR1O95747 527 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-227ENST00000498056 OPN1SWP03999 348 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 NAGAP17050 411 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 EVI2BP34910 448 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 CD97P48960 835 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 CEACAM7Q14002 265 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 MAPK11Q15759 364 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 LINC00303Q3SY05 128 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 LACTB2Q53H82 288 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-227ENST00000498056 INTS11Q5TA45 600 aaKnown RBP12.46□□□□□ -0.41
CPNE1-227ENST00000498056 BICRALQ6AI39 1079 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 SLC30A8Q8IWU4 369 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 ZADH2Q8N4Q0 377 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 GATSQ8NAP1 163 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF527Q8NB42 609 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 GOLM1Q8NBJ4 401 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 PSD4Q8NDX1 1056 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 FAM110BQ8TC76 370 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 FIG4Q92562 907 aa12.46□□□□□ -0.41
CPNE1-227ENST00000498056 TMCO6Q96DC7 493 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms