RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 CNPY1Q3B7I2 92 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 CGB2Q6NT52 195 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 ABRAXAS1Q6UWZ7 409 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 ZNF410Q86VK4 478 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 FAM228AQ86W67 206 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 ECHDC2Q86YB7 292 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 METTL13Q8N6R0 699 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 ZNF525Q8N782 197 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 KIAA0895Q8NCT3 520 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 CNNM3Q8NE01 707 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 TBCKQ8TEA7 893 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 GTSF1Q8WW33 167 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 TCP11Q8WWU5 503 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 DNASE1L2Q92874 299 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 GBP5Q96PP8 586 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 SIGLEC12Q96PQ1 595 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 ERGIC2Q96RQ1 377 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 GCOM2Q9BZD3 368 aaPredicted RBP3.76□□□□□ -1.81
MDM2-220ENST00000496959 ZNF665Q9H7R5 613 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 LY9Q9HBG7 655 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 AMBNQ9NP70 447 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 NRBP2Q9NSY0 501 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 IL17CQ9P0M4 197 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 CLEC4EQ9ULY5 219 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 FAM208BQ5VWN6 2430 aa3.76□□□□□ -1.81
MDM2-220ENST00000496959 CYTH3O43739 400 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 ATP9AO75110 1047 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 LETM1O95202 739 aaPredicted RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 GPX3P22352 226 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 MEOX2P50222 304 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 NAPAP54920 295 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 SLC3A1Q07837 685 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 NCBP1Q09161 790 aaKnown RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 GSG1Q2KHT4 349 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 TWF2Q6IBS0 349 aaKnown RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 DCLRE1AQ6PJP8 1040 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 SAP25Q8TEE9 199 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 NTNG2Q96CW9 530 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 CCDC51Q96ER9 411 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 MSANTD3Q96H12 275 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 RWDD1Q9H446 243 aaPredicted RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 DPEP3Q9H4B8 488 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 ELL3Q9HB65 397 aaPredicted RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 ABCC13Q9NSE7 274 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 SENP1Q9P0U3 644 aa3.75□□□□□ -1.81
MDM2-220ENST00000496959 PDCD11Q14690 1871 aaKnown RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 MAP1BP46821 2468 aaKnown RBP3.75□□□□□ -1.81
MDM2-220ENST00000496959 EPG5Q9HCE0 2579 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 NCOR2Q9Y618 2525 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 ESYT2A0FGR8 921 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 TNFSF11O14788 317 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CTDSPLO15194 276 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 HDAC3O15379 428 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 GNA11P29992 359 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 AXLP30530 894 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 HOXA9P31269 272 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 RPS9P46781 194 aaKnown RBP3.74□□□□□ -1.81
MDM2-220ENST00000496959 GPC3P51654 580 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 NLRP11P59045 1033 aaKnown RBP3.74□□□□□ -1.81
MDM2-220ENST00000496959 STARD6P59095 220 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 SLC17A1Q14916 467 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 PSMD6Q15008 389 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 C2orf83Q53S99 150 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CLLU1OSQ5K130 101 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 LIN9Q5TKA1 542 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 PLA2G4DQ86XP0 818 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CCDC89Q8N998 374 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CCDC148Q8NFR7 591 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 GANCQ8TET4 914 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 UBLCP1Q8WVY7 318 aaPredicted RBP3.74□□□□□ -1.81
MDM2-220ENST00000496959 ESAMQ96AP7 390 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 RIT2Q99578 217 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 MAPKAP1Q9BPZ7 522 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 VNN3Q9NY84 501 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CDH7Q9ULB5 785 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CNOT1A5YKK6 2376 aaKnown RBP3.74□□□□□ -1.81
MDM2-220ENST00000496959 SPTBN2O15020 2390 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 CFAP54Q96N23 3096 aa3.74□□□□□ -1.81
MDM2-220ENST00000496959 SF3B1O75533 1304 aaKnown RBP eCLIP3.73□□□□□ -1.816e-7■■■■■ 32.6
MDM2-220ENST00000496959 WDFY4Q6ZS81 3184 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 F5P12259 2224 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 RNF212BA8MTL3 300 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 E7EWF7 191 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 SLC30A4O14863 429 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 ERLIN2O94905 339 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 CCNE2O96020 404 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 KRT6AP02538 564 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 KRT6BP04259 564 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 FCGR3AP08637 254 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 GLULP15104 373 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 MDH2P40926 338 aaKnown RBP3.73□□□□□ -1.81
MDM2-220ENST00000496959 KRT6CP48668 564 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 PRKCEQ02156 737 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 ITGB3BPQ13352 177 aaPredicted RBP3.73□□□□□ -1.81
MDM2-220ENST00000496959 HTR4Q13639 388 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 TRAT1Q6PIZ9 186 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 GET4Q7L5D6 327 aaPredicted RBP3.73□□□□□ -1.81
MDM2-220ENST00000496959 CATSPER4Q7RTX7 472 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 METTL23Q86XA0 190 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 ZBTB44Q8NCP5 570 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms