RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SLC13A4	Q9UKG4	626 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	BAG5	Q9UL15	447 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	ABCG2	Q9UNQ0	655 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF232	Q9UNY5	417 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	POMP	Q9Y244	141 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	GXYLT2	A0PJZ3	443 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973		K7ENP7	123 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	WWP2	O00308	870 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	SCD	O00767	359 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	PRKN	O60260	465 aa	Predicted RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	TSPAN2	O60636	221 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	OR2J2	O76002	312 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	CAPNS1	P04632	268 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	CHRM4	P08173	479 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	WT1	P19544	449 aa	Predicted RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	KDELR2	P33947	212 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	RFX3	P48380	749 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	ATP12A	P54707	1039 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	FOXK2	Q01167	660 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973		Q0VFX4	171 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	FUT5	Q11128	374 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	LRRC23	Q53EV4	343 aa	Predicted RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	TBCEL	Q5QJ74	424 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	ACER2	Q5QJU3	275 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	TYW3	Q6IPR3	259 aa	Known RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	INO80C	Q6PI98	192 aa	Predicted RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	FIGNL1	Q6PIW4	674 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	ISLR2	Q6UXK2	745 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	FRRS1	Q6ZNA5	592 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	ARMC8	Q8IUR7	673 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	MISP	Q8IVT2	679 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	THAP3	Q8WTV1	239 aa	Predicted RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	APOBEC4	Q8WW27	367 aa	Known RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	TM9SF4	Q92544	642 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	RNF32	Q9H0A6	362 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	SLC38A1	Q9H2H9	487 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	CDCP1	Q9H5V8	836 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	OLAH	Q9NV23	265 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	HPF1	Q9NWY4	346 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	KLHL28	Q9NXS3	571 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	EGFL7	Q9UHF1	273 aa		12.49	□□□□□ -0.41
APTX-231	ENST00000494973	GPC6	Q9Y625	555 aa	Predicted RBP	12.49	□□□□□ -0.41
APTX-231	ENST00000494973	DCHS1	Q96JQ0	3298 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973		A0A1W2PQD3	144 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	MED19	A0JLT2	244 aa	Predicted RBP	12.48	□□□□□ -0.41
APTX-231	ENST00000494973	AGAP5	A6NIR3	686 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	TMEM200C	A6NKL6	621 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	ACOT8	O14734	319 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	SUV39H1	O43463	412 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	NADK	O95544	446 aa	Predicted RBP	12.48	□□□□□ -0.41
APTX-231	ENST00000494973	C1QC	P02747	245 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	CELA2A	P08217	269 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	UMPS	P11172	480 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	PRKAR1B	P31321	381 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	SOX11	P35716	441 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	DCT	P40126	519 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	CHRNE	Q04844	493 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	SRSF6	Q13247	344 aa	Known RBP	12.48	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF141	Q15928	474 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	NTRK2	Q16620	822 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	DEFB109B	Q30KR1	87 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	CCNJ	Q5T5M9	372 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	ATP1A1-AS1	Q5TC04	95 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	TMEM81	Q6P7N7	255 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	RTL4	Q6ZR62	310 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	SIRT6	Q8N6T7	355 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	FAM156A	Q8NDB6	213 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	WDR60	Q8WVS4	1066 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	SLC35B4	Q969S0	331 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	LMF1	Q96S06	567 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	UGT2B28	Q9BY64	529 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12.48	□□□□□ -0.41
APTX-231	ENST00000494973	GPR83	Q9NYM4	423 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	PRDM4	Q9UKN5	801 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	PACSIN3	Q9UKS6	424 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	SLC35A3	Q9Y2D2	325 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	PCDHGB7	Q9Y5F8	929 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	KCNMB2	Q9Y691	235 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	KCNE3	Q9Y6H6	103 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	NCOR2	Q9Y618	2525 aa		12.48	□□□□□ -0.41
APTX-231	ENST00000494973	PRAMEF27	A3QJZ7	478 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973		H0YHG0	523 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	SYT5	O00445	386 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	NME6	O75414	186 aa	Predicted RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	UTS2	O95399	124 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	GPI	P06744	558 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	C8B	P07358	591 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	PABPC4L	P0CB38	370 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	IL7R	P16871	459 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	TBXA2R	P21731	343 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	RPS4Y1	P22090	263 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	PSMA4	P25789	261 aa	Known RBP	12.47	□□□□□ -0.41
APTX-231	ENST00000494973	AQP1	P29972	269 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	CYB561	P49447	251 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	HLCS	P50747	726 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	MFAP5	Q13361	173 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	SNTA1	Q13424	505 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	GPR68	Q15743	365 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	RNF220	Q5VTB9	566 aa		12.47	□□□□□ -0.41
APTX-231	ENST00000494973	BORA	Q6PGQ7	559 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms