RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 EXT1Q16394 746 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 DECR1Q16698 335 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 CCNJQ5T5M9 372 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 HLA-DQA1Q5Y7H0 255 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 HSDL2Q6YN16 418 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PEX5LQ8IYB4 626 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 BCORP1Q8N888 145 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 OR4N2Q8NGD1 307 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PROX1Q92786 737 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 C8orf44Q96CB5 159 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 IMMP1LQ96LU5 166 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 MESP1Q9BRJ9 268 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 BDH2Q9BUT1 245 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 NRSN2Q9GZP1 204 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
VPS26A-205ENST00000489656 EVA1AQ9H8M9 152 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 ASCL3Q9NQ33 180 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
VPS26A-205ENST00000489656 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF232Q9UNY5 417 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 OR10H1Q9Y4A9 318 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 IL33O95760 270 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 EPPINO95925 133 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 MT-ND1P03886 318 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ITGA2P17301 1181 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ATP6V1C1P21283 382 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 PUM1Q14671 1186 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 LARS2Q15031 903 aaKnown RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 TRIP10Q15642 601 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF141Q15928 474 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 NRF1Q16656 503 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZSWIM7Q19AV6 140 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 EIPR1Q53HC9 387 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 PPP1R32Q7Z5V6 425 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 TSEN54Q7Z6J9 526 aaKnown RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZAR1Q86SH2 424 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 AMIGO2Q86SJ2 522 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 DTX1Q86Y01 620 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 SLC34A3Q8N130 599 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 M1APQ8TC57 530 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ELP5Q8TE02 316 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZG16BQ96DA0 208 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF300Q96RE9 604 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF347Q96SE7 839 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ARHGDIGQ99819 225 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 VCX3BQ9H321 246 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 NDUFAF4Q9P032 175 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 KCND3Q9UK17 655 aa13.08□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF443Q9Y2A4 671 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-205ENST00000489656 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 UGT2B17O75795 530 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 CST1P01037 141 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 IFNW1P05000 195 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 NID1P14543 1247 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 PEX2P28328 305 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 DLSTP36957 453 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 ATP12AP54707 1039 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
VPS26A-205ENST00000489656 GK3PQ14409 553 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 RTP5Q14D33 572 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 GPR68Q15743 365 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 NNATQ16517 81 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 MAPK14Q16539 360 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 RSPO4Q2I0M5 234 aaPredicted RBP13.07□□□□□ -0.32
VPS26A-205ENST00000489656 FLYWCH1Q4VC44 716 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 LIN52Q52LA3 116 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 OR2T5Q6IEZ7 315 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 CARM1Q86X55 608 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 OR2T29Q8NH02 315 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 DIO2Q92813 273 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 NKD1Q969G9 470 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 SLC35B4Q969S0 331 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 HOXD1Q9GZZ0 328 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 MMP25Q9NPA2 562 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 C8orf4Q9NR00 106 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 KCNE5Q9UJ90 142 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms