RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 A0A087WZY1 265 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 H0YL77 283 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 ADAM12O43184 909 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 STX11O75558 287 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 ANXA3P12429 323 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 BCL3P20749 454 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 GDF1P27539 372 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 RPA1P27694 616 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 ALDH3B2P48448 385 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 TRPC1P48995 793 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 P2RY4P51582 365 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 HTD2P86397 168 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 IL18R1Q13478 541 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 CYP51A1Q16850 503 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 DCAF4L1Q3SXM0 396 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 TEX44Q53QW1 395 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 OR8G2PQ6IF36 304 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 BTNL3Q6UXE8 466 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 HACD2Q6Y1H2 254 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 CATSPER4Q7RTX7 472 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 UNC5CLQ8IV45 518 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 CENPLQ8N0S6 344 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 CD177Q8N6Q3 437 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 OR52B4Q8NGK2 314 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 C11orf24Q96F05 449 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 AKR1E2Q96JD6 320 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 C16orf45Q96MC5 204 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 EHFQ9NZC4 300 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 ATXN10Q9UBB4 475 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 FOXJ3Q9UPW0 622 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 FLVCR1Q9Y5Y0 555 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 ATRXP46100 2492 aa2.87□□□□□ -1.95
HMGB1P36-201ENST00000487709 RALGAPA1Q6GYQ0 2036 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 USP6P35125 1406 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 GSAPA4D1B5 854 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 LRRC30A6NM36 301 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 CCT8L1PA6NM43 557 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 SRRM5B3KS81 715 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 F8WDY8 70 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 SAP18O00422 153 aaKnown RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 MAPK13O15264 365 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 TM9SF1O15321 606 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 IDH1O75874 414 aaKnown RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 VENTXO95231 258 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 PGK1P00558 417 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 IGKV3-15P01624 115 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 CSF2P04141 144 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 ALPIP09923 528 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 LAMP1P11279 417 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 DESP17661 470 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 DHPSP49366 369 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 GPC3P51654 580 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 RPS6P62753 249 aaKnown RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 NTHL1P78549 312 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 PLOD1Q02809 727 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 TMEM41BQ5BJD5 291 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 NAXDQ8IW45 347 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZNF525Q8N782 197 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 KLHL30-AS1Q8NEE0 82 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 NFAM1Q8NET5 270 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 CCDC26Q8TAB7 109 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZPLD1Q8TCW7 415 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 CCT8L2Q96SF2 557 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZNF416Q9BWM5 594 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 CRNKL1Q9BZJ0 848 aaKnown RBP2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 COMMD4Q9H0A8 199 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 WDR76Q9H967 626 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 ZNF446Q9NWS9 450 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC2A6Q9UGQ3 507 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 SMC3Q9UQE7 1217 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 GMPPBQ9Y5P6 360 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 MAD1L1Q9Y6D9 718 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 ATP8B3O60423 1300 aa2.86□□□□□ -1.95
HMGB1P36-201ENST00000487709 NCAPD2Q15021 1401 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 RNF222A6NCQ9 220 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 CLDN5O00501 218 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC17A2O00624 439 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 TNFSF11O14788 317 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 HAT1O14929 419 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 DUSP14O95147 198 aaKnown RBP2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC2A10O95528 541 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 PRG2P13727 222 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 ATP5A1P25705 553 aaKnown RBP2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 OR1D4P47884 311 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 SLC26A2P50443 739 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 RND3P61587 244 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 PAX2Q02962 417 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 ASAH1Q13510 395 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 TFDP1Q14186 410 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 TRIP10Q15642 601 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 NIPAL3Q6P499 406 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 SYT10Q6XYQ8 523 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 TMEM184AQ6ZMB5 413 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 PRSS48Q7RTY5 328 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 TMEM17Q86X19 198 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 CBWD2Q8IUF1 395 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 APOBEC3FQ8IUX4 373 aaKnown RBP2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 GCNT2Q8N0V5 402 aa2.85□□□□□ -1.95
HMGB1P36-201ENST00000487709 OR5AU1Q8NGC0 362 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms