RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FADS1O60427 444 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 IGKV1D-16P01601 117 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 ALOX5P09917 674 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 ACP2P11117 423 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 G6PDP11413 515 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 HK1P19367 917 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 MSX1P28360 303 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 UQCRC1P31930 480 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
COL6A1-204ENST00000486023 RPL14P50914 215 aaKnown RBP16.03■□□□□ 0.16
COL6A1-204ENST00000486023 DGKQP52824 942 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 PRR5P85299 388 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 TLE4Q04727 773 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 TFF3Q07654 80 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 MYBPHQ13203 477 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 RAET1LQ5VY80 246 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 AAGABQ6PD74 315 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 CROCCP2Q86T23 111 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 LACC1Q8IV20 430 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 UBQLNLQ8IYU4 475 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 GATSQ8NAP1 163 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 SLC16A11Q8NCK7 471 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 MS4A4EQ96PG1 132 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 TUBA1CQ9BQE3 449 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 RTN4RQ9BZR6 473 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 OR2B2Q9GZK3 357 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 AKTIPQ9H8T0 292 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 ATAD3AQ9NVI7 634 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 APCP25054 2843 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 ADGRG4Q8IZF6 3080 aa16.03■□□□□ 0.16
COL6A1-204ENST00000486023 PKDREJQ9NTG1 2253 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 CREBBPQ92793 2442 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 B4DXG7 233 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 DVL2O14641 736 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 ZIC3O60481 467 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 ANGPTL1O95841 491 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 C6orf47O95873 294 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 PRPS1L1P21108 318 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 SSTR2P30874 369 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.16
COL6A1-204ENST00000486023 DSCR4P56555 118 aaPredicted RBP16.02■□□□□ 0.16
COL6A1-204ENST00000486023 TP53BP2Q13625 1128 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 DUSP5Q16690 384 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 CCNJQ5T5M9 372 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 NSUN5P2Q63ZY6 315 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 COX18Q8N8Q8 333 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 OR2M3Q8NG83 312 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 FAM120BQ96EK7 910 aaKnown RBP16.02■□□□□ 0.16
COL6A1-204ENST00000486023 DTNBP1Q96EV8 351 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 GIMAP5Q96F15 307 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 PGM2Q96G03 612 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 ZNF764Q96H86 408 aaPredicted RBP16.02■□□□□ 0.16
COL6A1-204ENST00000486023 PTGES2Q9H7Z7 377 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 PNPOQ9NVS9 261 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 FBXO34Q9NWN3 711 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 RAP2CQ9Y3L5 183 aa16.02■□□□□ 0.16
COL6A1-204ENST00000486023 DCHS2Q6V1P9 2916 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 FBN2P35556 2912 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 ERLIN1O75477 346 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 NKX2-2O95096 273 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 HMGN2P05204 90 aaKnown RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 HPGDP15428 266 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 SOAT1P35610 550 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 CCT3P49368 545 aaKnown RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 PRIM2P49643 509 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 RNF144AP50876 292 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 KRTAP10-9P60411 292 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 EMX2Q04743 252 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 LASP1Q14847 261 aaKnown RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 SLC25A35Q3KQZ1 300 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 MFSD12Q6NUT3 480 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 CHMP1BQ7LBR1 199 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 OR5AK3PQ8NH89 298 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 OR5P2Q8WZ92 322 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 SMPDL3BQ92485 455 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 LURAP1Q96LR2 239 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 DUSP26Q9BV47 211 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 NUF2Q9BZD4 464 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 CXorf36Q9H7Y0 433 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 SIRT3Q9NTG7 399 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 FAM120CQ9NX05 1096 aaKnown RBP16.01■□□□□ 0.15
COL6A1-204ENST00000486023 ABCG2Q9UNQ0 655 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 TACC2O95359 2948 aa16.01■□□□□ 0.15
COL6A1-204ENST00000486023 MYO9AB2RTY4 2548 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 TTC36A6NLP5 189 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 CLCA1A8K7I4 914 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 SHISA8B8ZZ34 492 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 KCNK2O95069 426 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 DHRS4L1P0CG22 281 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 CPN1P15169 458 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 POU3F2P20265 443 aaPredicted RBP16■□□□□ 0.15
COL6A1-204ENST00000486023 CEACAM8P31997 349 aaPredicted RBP16■□□□□ 0.15
COL6A1-204ENST00000486023 TIMP3P35625 211 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 ZNF136P52737 540 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 DIO3P55073 304 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 GFRA1P56159 465 aa16■□□□□ 0.15
COL6A1-204ENST00000486023 C17orf67Q0P5P2 114 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms