RNA–Protein interactions for RNA: ENST00000485400.1

MMS19-218, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 1,513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-218	ENST00000485400	TMEM38A	Q9H6F2	299 aa		13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	LRFN1	Q9P244	771 aa		13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	CD300A	Q9UGN4	299 aa		13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	EGFL7	Q9UHF1	273 aa		13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	PCDHGB3	Q9Y5G1	929 aa		13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.99	□□□□□ -0.17
MMS19-218	ENST00000485400	C2orf72	A6NCS6	295 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	FAM220BP	B1ANY3	271 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	MKRN2OS	H3BPM6	223 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	ABCB7	O75027	752 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	AGR2	O95994	175 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	CYB561	P49447	251 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	PNLIPRP2	P54317	469 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	EEFSEC	P57772	596 aa	Known RBP	13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	ARG2	P78540	354 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	OR1C1	Q15619	314 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	MAPK14	Q16539	360 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	FLYWCH1	Q4VC44	716 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	COLEC12	Q5KU26	742 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	PRAMEF20	Q5VT98	475 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	APOOL	Q6UXV4	268 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	EXD3	Q8N9H8	876 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	TREX2	Q9BQ50	279 aa	Predicted RBP	13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	ARHGAP9	Q9BRR9	750 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	NDE1	Q9NXR1	346 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	WDR45	Q9Y484	360 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	HRH3	Q9Y5N1	445 aa		13.98	□□□□□ -0.17
MMS19-218	ENST00000485400	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.98	□□□□□ -0.17
MMS19-218	ENST00000485400		A0A0G2JMM0	328 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400		A0A1W2PPB8	328 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400		A0A1W2PRS3	328 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	OR5H15	A6NDH6	313 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	OR6C70	A6NIJ9	312 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	KIR3DP1	A8MWS1	328 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	STX11	O75558	287 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	UGT2B17	O75795	530 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	PGM3	O95394	542 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	UTS2	O95399	124 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	ATP6V1C1	P21283	382 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	MAGEA8	P43361	318 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	KCNAB2	Q13303	367 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	INPP5J	Q15735	1006 aa	Predicted RBP	13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	LRRC74B	Q6ZQY2	392 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	HPS6	Q86YV9	775 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	MICU2	Q8IYU8	434 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	GATS	Q8NAP1	163 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	C11orf65	Q8NCR3	313 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	GRHL3	Q8TE85	626 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	SLC39A7	Q92504	469 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	HAS2	Q92819	552 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	ARSG	Q96EG1	525 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	REXO5	Q96IC2	774 aa	Known RBP	13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	TRNT1	Q96Q11	434 aa	Known RBP	13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	MFRP	Q9BY79	579 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	PCDHAC1	Q9H158	963 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	GALNT9	Q9HCQ5	603 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	SH2D2A	Q9NP31	389 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	KLHL1	Q9NR64	748 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	ABI3	Q9P2A4	366 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	LIPT1	Q9Y234	373 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	ITPR1	Q14643	2758 aa		13.97	□□□□□ -0.17
MMS19-218	ENST00000485400	ELOVL7	A1L3X0	281 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	ERICH4	A6NGS2	130 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	CLDN24	A6NM45	220 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	C5orf58	C9J3I9	102 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	ADAM10	O14672	748 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	GSC2	O15499	205 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	SCO2	O43819	266 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	KIAA0513	O60268	411 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	DNAJA2	O60884	412 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	ATP5H	O75947	161 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	OXSR1	O95747	527 aa	Predicted RBP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	AK1	P00568	194 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	OPN1SW	P03999	348 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	NAGA	P17050	411 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	DCT	P40126	519 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	PTGDS	P41222	190 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	CRYBA2	P53672	197 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	CRISP3	P54108	245 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	GPR85	P60893	370 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	TXNL4A	P83876	142 aa	Known RBP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	ZSCAN26	Q16670	478 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	ZNF630	Q2M218	657 aa	Predicted RBP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	LACTB2	Q53H82	288 aa	Predicted RBP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	PDZK1	Q5T2W1	519 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	PCSK4	Q6UW60	755 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	NUP54	Q7Z3B4	507 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	LSR	Q86X29	649 aa	Predicted RBP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	VRK2	Q86Y07	508 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	ZNF614	Q8N883	585 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	MDS2	Q8NDY4	140 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	SPPL2A	Q8TCT8	520 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	G6PC3	Q9BUM1	346 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	SAP130	Q9H0E3	1048 aa		13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.96	□□□□□ -0.17
MMS19-218	ENST00000485400	PROK2	Q9HC23	129 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms