RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DDX5P17844 614 aaKnown RBP11.16□□□□□ -0.62
MSH5-216ENST00000484309 SRD5A2P31213 254 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 SOAT1P35610 550 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 ZFP36L2P47974 494 aaKnown RBP11.16□□□□□ -0.62
MSH5-216ENST00000484309 STARP49675 285 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 PRR5P85299 388 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 EMX2Q04743 252 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 SRYQ05066 204 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 MAD2L1Q13257 205 aaPredicted RBP11.16□□□□□ -0.62
MSH5-216ENST00000484309 CASP8Q14790 479 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 LASP1Q14847 261 aaKnown RBP11.16□□□□□ -0.62
MSH5-216ENST00000484309 SPDYE7PQ495Y7 208 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 VPS26BQ4G0F5 336 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 CCNJQ5T5M9 372 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 OR4F3Q6IEY1 312 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 PLXDC2Q6UX71 529 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 ZAR1Q86SH2 424 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 IFNEQ86WN2 208 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 LIX1LQ8IVB5 337 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 TRIM42Q8IWZ5 723 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 RIMKLAQ8IXN7 391 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 COX18Q8N8Q8 333 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 CDRT4Q8N9R6 151 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 GATSQ8NAP1 163 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 OR5AK3PQ8NH89 298 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 LILRB4Q8NHJ6 448 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 TLCD1Q96CP7 247 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 TRIB1Q96RU8 372 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 DUSP26Q9BV47 211 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 PRDM14Q9GZV8 571 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 ATAD3AQ9NVI7 634 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 FBXO34Q9NWN3 711 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 FAM120CQ9NX05 1096 aaKnown RBP11.16□□□□□ -0.62
MSH5-216ENST00000484309 TAS2R10Q9NYW0 307 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 MED11Q9P086 117 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 MRTO4Q9UKD2 239 aaKnown RBP11.16□□□□□ -0.62
MSH5-216ENST00000484309 HEATR5AQ86XA9 2040 aa11.16□□□□□ -0.62
MSH5-216ENST00000484309 GOLGA8QA0A0J9YX86 632 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 GOLGA8OA6NCC3 632 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 TTC36A6NLP5 189 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 GOLGA8NF8WBI6 632 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 H0Y3Z8 333 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 TOXO94900 526 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 HMGN2P05204 90 aaKnown RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 ALOX5P09917 674 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 KITP10721 976 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 PRPS1L1P21108 318 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 DPP4P27487 766 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 GCKP35557 465 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 MAP3K8P41279 467 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 CCT3P49368 545 aaKnown RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 PRIM2P49643 509 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 RNF144AP50876 292 aaPredicted RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 PSMD4P55036 377 aaKnown RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 NME5P56597 212 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 CLDN8P56748 225 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 MLC1Q15049 377 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 NHSL2Q5HYW2 709 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 APOOLQ6UXV4 268 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 MEX3BQ6ZN04 569 aaKnown RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 CLECL1Q8IZS7 167 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 CLEC4FQ8N1N0 589 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 NAXEQ8NCW5 288 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 OR2M3Q8NG83 312 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 OR5M1Q8NGP8 315 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 HOXB13Q92826 284 aaPredicted RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 CDS1Q92903 461 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 ARL8AQ96BM9 186 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 COQ8BQ96D53 544 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 SFXN2Q96NB2 322 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 PRPF18Q99633 342 aaKnown RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 TBL1XR1Q9BZK7 514 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 KCNJ16Q9NPI9 418 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 NPDC1Q9NQX5 325 aaPredicted RBP11.15□□□□□ -0.62
MSH5-216ENST00000484309 ASIC5Q9NY37 505 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 NKIRAS1Q9NYS0 192 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 NTMQ9P121 344 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 HAO1Q9UJM8 370 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 ABCG2Q9UNQ0 655 aa11.15□□□□□ -0.62
MSH5-216ENST00000484309 APCP25054 2843 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 NPIPA5A0A0B4J1W7 369 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 AHRRA9YTQ3 701 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 C9JVG2 144 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 NPIPA7E9PJI5 369 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 SDHDO14521 159 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 KCNK2O95069 426 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 ANGPTL1O95841 491 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 EPPINO95925 133 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 ACTL6AO96019 429 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 HOXD4P09016 255 aaPredicted RBP11.14□□□□□ -0.63
MSH5-216ENST00000484309 NPIPA8P0DM63 369 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 LBPP18428 481 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 HK1P19367 917 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 PTGER4P35408 488 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 CLK3P49761 638 aaKnown RBP11.14□□□□□ -0.63
MSH5-216ENST00000484309 GFRA1P56159 465 aa11.14□□□□□ -0.63
MSH5-216ENST00000484309 RPS26P62854 115 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms