RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 RAET1LQ5VY80 246 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 UBQLNLQ8IYU4 475 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 GCNT2Q8N0V5 402 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 CEP70Q8NHQ1 597 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 ZFP28Q8NHY6 868 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 GFM2Q969S9 779 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 DACH2Q96NX9 599 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 PIGQQ9BRB3 760 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 TRMOQ9BU70 441 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 TBL1XR1Q9BZK7 514 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 TUBB1Q9H4B7 451 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 L2HGDHQ9H9P8 463 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 HHATLQ9HCP6 504 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 PACSIN3Q9UKS6 424 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 PLEKHA6Q9Y2H5 1048 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 FIS1Q9Y3D6 152 aa12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-208ENST00000482272 TLDC2A0PJX2 215 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 A8MXE2 369 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 PDPK1O15530 556 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 HCRTR2O43614 444 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 TNFRSF21O75509 655 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 TGM6O95932 706 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 NEFHP12036 1026 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 DDX5P17844 614 aaKnown RBP12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 PRKAG1P54619 331 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 MANFP55145 182 aaKnown RBP12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 HSPB3Q12988 150 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 STX5Q13190 355 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 ZNF385BQ569K4 471 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 RNF165Q6ZSG1 346 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 Q6ZSR9 355 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 MARCH3Q86UD3 253 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 GPR151Q8TDV0 419 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 PPCDCQ96CD2 204 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 ZBED6CLQ96FA7 236 aaPredicted RBP12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 ZNF764Q96H86 408 aaPredicted RBP12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 REEP4Q9H6H4 257 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 GALNT8Q9NY28 637 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 SH3BP4Q9P0V3 963 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 STOML1Q9UBI4 398 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 TMED5Q9Y3A6 229 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 ZNF337Q9Y3M9 751 aa12.15□□□□□ -0.46
CTDSP1-208ENST00000482272 HIVEP1P15822 2718 aa12.15□□□□□ -0.47
CTDSP1-208ENST00000482272 TMEM233B4DJY2 109 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 H3BML4 177 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 MSTNO14793 375 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 AKAP10O43572 662 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 TBX19O60806 448 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 ANGPTL1O95841 491 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 RAF1P04049 648 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 FGF4P08620 206 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 LINC00032P0C843 101 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 ARRB2P32121 409 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 RPS3AP61247 264 aaKnown RBP12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 PRR5P85299 388 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 KEAP1Q14145 624 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 RFTN2Q52LD8 501 aaPredicted RBP12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 ANKRD26P1Q6NSI1 321 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 TGIF2LYQ8IUE0 185 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 CNEP1R1Q8N9A8 125 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 CDRT4Q8N9R6 151 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 NUP43Q8NFH3 380 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 PIK3R3Q92569 461 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 C1GALT1C1Q96EU7 318 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 ALPK1Q96QP1 1244 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 CCT7Q99832 543 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 GATA5Q9BWX5 397 aaPredicted RBP12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 EML4Q9HC35 981 aaKnown RBP12.14□□□□□ -0.47
CTDSP1-208ENST00000482272 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 A0A1W2PNV4 684 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 OR2M5A3KFT3 312 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 SH3D21A4FU49 640 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 SEC14L5O43304 696 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 TNFSF13O75888 250 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 SMNDC1O75940 238 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■■■ 27.2
CTDSP1-208ENST00000482272 NKX2-2O95096 273 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 UTS2O95399 124 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 CHRNGP07510 517 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 SDC1P18827 310 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 CPOXP36551 454 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 ASMTP46597 345 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 PCYT1AP49585 367 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 RPL38P63173 70 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 OCRLQ01968 901 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 FGFBP1Q14512 234 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 SGCBQ16585 318 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 GALNTL6Q49A17 601 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 KANK2Q63ZY3 851 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 ZCCHC12Q6PEW1 402 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 PAMR1Q6UXH9 720 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
CTDSP1-208ENST00000482272 R3HCC1LQ7Z5L2 792 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms