RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 AMBNQ9NP70 447 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 FZD3Q9NPG1 666 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLAMF7Q9NQ25 335 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PRSS16Q9NQE7 514 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PHPT1Q9NRX4 125 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 TRNAU1APQ9NX07 287 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 GPR83Q9NYM4 423 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 THAP10Q9P2Z0 257 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SEC14L3Q9UDX4 400 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLC23A2Q9UGH3 650 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ACAD8Q9UKU7 415 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 PNMA8BQ9ULN7 279 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CFL2Q9Y281 166 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SLC9A8Q9Y2E8 581 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 IFT52Q9Y366 437 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 SF3B6Q9Y3B4 125 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 RPL36Q9Y3U8 105 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 CFAP20Q9Y6A4 193 aaKnown RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 VPS13AQ96RL7 3174 aa4.64□□□□□ -1.67
SF3B6-202ENST00000478050 MN1Q10571 1320 aaPredicted RBP4.64□□□□□ -1.67
SF3B6-202ENST00000478050 ABCA12Q86UK0 2595 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SPTAN1Q13813 2472 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 A0A075B6Q4 140 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 A0A0G2JPF8 293 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 LOC100506127A0A0U1RQW1 187 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TCRBV16S1A1N1A0A5B0 115 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 FEZF1A0PJY2 475 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 IRGMA1A4Y4 181 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TBC1D3BA6NDS4 549 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 IGLON5A6NGN9 336 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 HNRNPCL2B2RXH8 293 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 HNRNPCL3B7ZW38 293 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 LOC110117498-PIK3R3F6TDL0 507 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 H0Y8X5 98 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 H7BY64 318 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OVOL3O00110 214 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 FFAR1O14842 300 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 DSCR3O14972 297 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CASC3O15234 703 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ZW10O43264 779 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TMPRSS11DO60235 418 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 KDM1AO60341 852 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR10H3O60404 316 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 B4GALT2O60909 372 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 UGT2B17O75795 530 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PCDH8O95206 1070 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SNX4O95219 450 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SCGB1D2O95969 90 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 APODP05090 189 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CD3EP07766 207 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 HNRNPCL4P0DMR1 293 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR12D1P0DN82 309 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 NR2F1P10589 423 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 POU2F1P14859 743 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ENDOUP21128 410 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 GSTM3P21266 225 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 C5AR1P21730 350 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 POU1F1P28069 291 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PKLRP30613 574 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 GRK5P34947 590 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 DRD3P35462 400 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 AHRP35869 848 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OPRD1P41143 372 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SSR2P43308 183 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TSFMP43897 325 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 RAB28P51157 221 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CLCNKAP51800 687 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CRISP3P54108 245 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SLURP1P55000 103 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TAS2R38P59533 333 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 IFITM3Q01628 133 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PRDX1Q06830 199 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 HSPB3Q12988 150 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CBX3Q13185 183 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TP53BP2Q13625 1128 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CAMK1Q14012 370 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 IRF4Q15306 451 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MED22Q15528 200 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MAPK11Q15759 364 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CST6Q15828 149 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ZIC1Q15915 447 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TSTQ16762 297 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 WSCD2Q2TBF2 565 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SOWAHCQ53LP3 525 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MFSD4BQ5TF39 518 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 AGBL4Q5VU57 503 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TCTN3Q6NUS6 607 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PGBD2Q6P3X8 592 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CD300LDQ6UXZ3 194 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 DEF8Q6ZN54 512 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SLC22A16Q86VW1 577 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 LYSMD2Q8IV50 215 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TP53I13Q8NBR0 393 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SRFBP1Q8NEF9 429 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR56A1Q8NGH5 318 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR8J1Q8NGP2 316 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR9Q1Q8NGQ5 310 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 WDR36Q8NI36 951 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SUN3Q8TAQ9 357 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CREB3L4Q8TEY5 395 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms