RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TECTBQ96PL2 329 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ALS2CR12Q96Q35 445 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 S1PR3Q99500 378 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CCDC3Q9BQI4 270 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TSSK1BQ9BXA7 367 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 NLNQ9BYT8 704 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ROGDIQ9GZN7 287 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SEMA6AQ9H2E6 1030 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 GOLPH3Q9H4A6 298 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SAV1Q9H4B6 383 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 NARFLQ9H6Q4 476 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 EGLN3Q9H6Z9 239 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 KAT8Q9H7Z6 458 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ANKRA2Q9H9E1 313 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SEC61A2Q9H9S3 476 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SEBOXQ9HB31 216 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LYRM4Q9HD34 91 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MYOZ2Q9NPC6 264 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PXMP2Q9NR77 195 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 TUBG2Q9NRH3 451 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 NRBP2Q9NSY0 501 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ZDHHC18Q9NUE0 388 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 AHSPQ9NZD4 102 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PLEKHB1Q9UF11 243 aaPredicted RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 LRWD1Q9UFC0 647 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 HMGXB4Q9UGU5 601 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ASIC3Q9UHC3 531 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MRTO4Q9UKD2 239 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 RNF24Q9Y225 148 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 PPIL1Q9Y3C6 166 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CHST2Q9Y4C5 530 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 YIPF1Q9Y548 306 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 RIPK3Q9Y572 518 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SRPRBQ9Y5M8 271 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 CEP162Q5TB80 1403 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 NSD3Q9BZ95 1437 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MYO16Q9Y6X6 1858 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 SPENQ96T58 3664 aaKnown RBP2.64□□□□□ -1.99
HMGN4-202ENST00000477243 MROH7-TTC4A0A0A0MT08 1334 aa2.64□□□□□ -1.99
HMGN4-202ENST00000477243 ANKRD30AQ9BXX3 1397 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 TGP01266 2768 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 KIAA1551Q9HCM1 1747 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ATP6AP2A0A1C7CYW4 349 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 WDR27A2RRH5 827 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF840PA6NDX5 716 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ANTXRLA6NF34 631 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 SMCO2A6NFE2 343 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 SERINC4A6NH21 518 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 SHISA7A6NL88 538 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 KCNU1A8MYU2 1149 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 C17orf105B2RV13 164 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 B4DGG1 531 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 NPIPA7E9PJI5 369 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 TULP2O00295 520 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 CCSO14618 274 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ITGB1BP1O14713 200 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 WNT9BO14905 357 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 BUD23O43709 281 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 LPXNO60711 386 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 NEBLO76041 1014 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 WDPCPO95876 746 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ITGB2P05107 769 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 FCER2P06734 321 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 SLC35G4P0C7Q5 338 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 C1QTNF9P0C862 333 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 UBTFL1P0CB47 393 aaPredicted RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 OCMP0CE72 109 aaPredicted RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 GSTT2P0CG29 244 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 GSTT2BP0CG30 244 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 NPIPA8P0DM63 369 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 CTSAP10619 480 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 CYP2D6P10635 497 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 PCMT1P22061 227 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 IL32P24001 234 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 MMP11P24347 488 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 FPR3P25089 353 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 GTF2E2P29084 291 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 STX2P32856 288 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 PCK1P35558 622 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 CYLC1P35663 651 aaPredicted RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 AHRP35869 848 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 EIF2S3P41091 472 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 MNDAP41218 407 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 TMPOP42166 694 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 UQCRFS1P47985 274 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 SLC26A2P50443 739 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 VAMP7P51809 220 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 LIMK2P53671 638 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ZFP36L1Q07352 338 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ITPK1Q13572 414 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 PKP1Q13835 747 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 HEPACAMQ14CZ8 416 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 EXT1Q16394 746 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 PSG3Q16557 428 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ZSCAN26Q16670 478 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 KNOP1Q1ED39 458 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 C18orf21Q32NC0 220 aaPredicted RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 LSM12Q3MHD2 195 aaKnown RBP2.63□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF528Q3MIS6 628 aa2.63□□□□□ -1.99
HMGN4-202ENST00000477243 GLYR1Q49A26 553 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms