RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 RGNQ15493 299 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 INPP5JQ15735 1006 aaPredicted RBP18.31■□□□□ 0.52
SF1-213ENST00000472725 RUNDC3AQ59EK9 446 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 FIGNL1Q6PIW4 674 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.31■□□□□ 0.52
SF1-213ENST00000472725 MSRB3Q8IXL7 192 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 SNRNP40Q96DI7 357 aaKnown RBP18.31■□□□□ 0.52
SF1-213ENST00000472725 ANKRD27Q96NW4 1050 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 TRNT1Q96Q11 434 aaKnown RBP18.31■□□□□ 0.52
SF1-213ENST00000472725 CGREF1Q99674 301 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 IL1RL2Q9HB29 575 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 KLRF1Q9NZS2 232 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 LUZP4Q9P127 313 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.31■□□□□ 0.52
SF1-213ENST00000472725 KCNE3Q9Y6H6 103 aa18.31■□□□□ 0.52
SF1-213ENST00000472725 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
SF1-213ENST00000472725 TMEM247A6NEH6 219 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ACOT7O00154 380 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 MRASO14807 208 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 FADS1O60427 444 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ICOSLGO75144 302 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 TRIM3O75382 744 aaPredicted RBP18.3■□□□□ 0.52
SF1-213ENST00000472725 UTS2O95399 124 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 PRB1P04280 392 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 COX4I1P13073 169 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ENDOUP21128 410 aaKnown RBP18.3■□□□□ 0.52
SF1-213ENST00000472725 EVI2BP34910 448 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 CRATP43155 626 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 DSTNP60981 165 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 PRAMEF20Q5VT98 475 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 REP15Q6BDI9 236 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 SLC22A16Q86VW1 577 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 CISD2Q8N5K1 135 aaKnown RBP18.3■□□□□ 0.52
SF1-213ENST00000472725 METTL25Q8N6Q8 603 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ZNF527Q8NB42 609 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 CPT1CQ8TCG5 803 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 BCAS4Q8TDM0 211 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 GRHL3Q8TE85 626 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 FAR1Q8WVX9 515 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ROPN1LQ96C74 230 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 OTUB1Q96FW1 271 aaPredicted RBP18.3■□□□□ 0.52
SF1-213ENST00000472725 AURKBQ96GD4 344 aaPredicted RBP18.3■□□□□ 0.52
SF1-213ENST00000472725 ZNF597Q96LX8 424 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 TAAR6Q96RI8 345 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ZNF350Q9GZX5 532 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 SAP130Q9H0E3 1048 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 ZFP64Q9NPA5 681 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 QPCTLQ9NXS2 382 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 CALML5Q9NZT1 146 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 P2RX2Q9UBL9 471 aa18.3■□□□□ 0.52
SF1-213ENST00000472725 NINQ8N4C6 2090 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 A0A1W2PQD3 144 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 ALG1L2C9J202 215 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 NDUFAB1O14561 156 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 GLSO94925 669 aaPredicted RBP18.29■□□□□ 0.52
SF1-213ENST00000472725 HPGDP15428 266 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 PTGDSP41222 190 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 RFX3P48380 749 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 DNASE1L1P49184 302 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 GPR85P60893 370 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 HPCAP84074 193 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 FOXO1Q12778 655 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 COX20Q5RI15 118 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.29■□□□□ 0.52
SF1-213ENST00000472725 ZNF324BQ6AW86 544 aaPredicted RBP18.29■□□□□ 0.52
SF1-213ENST00000472725 MISPQ8IVT2 679 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 PNPT1Q8TCS8 783 aaKnown RBP18.29■□□□□ 0.52
SF1-213ENST00000472725 RAB8BQ92930 207 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 LRRC58Q96CX6 371 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 CPPED1Q9BRF8 314 aaPredicted RBP18.29■□□□□ 0.52
SF1-213ENST00000472725 EFCAB1Q9HAE3 211 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 B4GALT7Q9UBV7 327 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 AP3M1Q9Y2T2 418 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 WIF1Q9Y5W5 379 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 BOD1L1Q8NFC6 3051 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 CHD6Q8TD26 2715 aa18.29■□□□□ 0.52
SF1-213ENST00000472725 SCDO00767 359 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 ZNF24P17028 368 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 MASP1P48740 699 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 ATP12AP54707 1039 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 GAS1P54826 345 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 CASP9P55211 416 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 ALDH6A1Q02252 535 aaKnown RBP18.28■□□□□ 0.52
SF1-213ENST00000472725 FLYWCH1Q4VC44 716 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 KRTCAP3Q53RY4 240 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 CCNJQ5T5M9 372 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 PRAMEF8Q5VWM4 474 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 PRAMEF7Q5VXH5 474 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 DESI1Q6ICB0 168 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 HACD2Q6Y1H2 254 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 LRRC74BQ6ZQY2 392 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 TREML1Q86YW5 311 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 OR8J3Q8NGG0 315 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 NR4A3Q92570 626 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 TTTY12Q9BZ98 90 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 TBL1XR1Q9BZK7 514 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 OLAHQ9NV23 265 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 TUBA8Q9NY65 449 aaPredicted RBP18.28■□□□□ 0.52
SF1-213ENST00000472725 WDR45Q9Y484 360 aa18.28■□□□□ 0.52
SF1-213ENST00000472725 C15orf38-AP3S2A0A0A6YYH1 394 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms