RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 AP1B1Q10567 949 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 TWF1Q12792 350 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 MS4A18Q3C1V0 323 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 PPM1LQ5SGD2 360 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SDHAF4Q5VUM1 108 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SYPL2Q5VXT5 272 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 TMEM184AQ6ZMB5 413 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 C3P1Q6ZMU1 363 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CDHR3Q6ZTQ4 885 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 BNIPLQ7Z465 357 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SCD5Q86SK9 330 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 FAM131BQ86XD5 332 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 PSTKQ8IV42 348 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 KATNAL2Q8IYT4 538 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 RCOR2Q8IZ40 523 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 KLHDC1Q8N7A1 406 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 LEMD2Q8NC56 503 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 STKLD1Q8NE28 680 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CHPT1Q8WUD6 406 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 FAM172AQ8WUF8 416 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 METTL21AQ8WXB1 218 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 NDRG1Q92597 394 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 EXOC4Q96A65 974 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 PIWIL1Q96J94 861 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 C2orf48Q96LS8 159 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 MUS81Q96NY9 551 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CPNE1Q99829 537 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 ACAT2Q9BWD1 397 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 TRIM7Q9C029 511 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CARD9Q9H257 536 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.71
CCDC39-202ENST00000471307 C5AR2Q9P296 337 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 SNX12Q9UMY4 172 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 HYOU1Q9Y4L1 999 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 TRIOBPQ9H2D6 2365 aa4.4□□□□□ -1.71
CCDC39-202ENST00000471307 PLXNA3P51805 1871 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 ABCA7Q8IZY2 2146 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 EDDM13A0A1B0GTR0 161 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CLDN4O14493 209 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SNX3O60493 162 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 LRCH4O75427 683 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 B3GALNT1O75752 331 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 RECQL5O94762 991 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 IGLV3-25P01717 112 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 AADACP22760 399 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 IL4RP24394 825 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 MIPP30301 263 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CDC25CP30307 473 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CCR1P32246 355 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 RDXP35241 583 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 ATP5C1P36542 298 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SULT1E1P49888 294 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CAPZA1P52907 286 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 POLR2LP62875 67 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SLC25A11Q02978 314 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 NME3Q13232 169 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF177Q13360 481 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 EIF4EBP2Q13542 120 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 TRA2AQ13595 282 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 PTK6Q13882 451 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 OPCMLQ14982 345 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 PDK2Q15119 407 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 WHAMMP3Q1A5X7 153 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 C15orf32Q32M92 178 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 BRMS1LQ5PSV4 323 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 C10orf120Q5SQS8 335 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 ARMC4Q5T2S8 1044 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 C6orf163Q5TEZ5 329 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SCYL2Q6P3W7 929 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 PLBD1Q6P4A8 553 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 MNS1Q8NEH6 495 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 OR10G7Q8NGN6 311 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 DQX1Q8TE96 717 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 MAIP1Q8WWC4 291 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CASP10Q92851 521 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 TOMM40LQ969M1 308 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 NTAN1Q96AB6 310 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CNRIP1Q96F85 164 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 PDLIM5Q96HC4 596 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 RBM41Q96IZ5 413 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SERPINB11Q96P15 392 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 LRRC3BQ96PB8 259 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 NAP1L3Q99457 506 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SLC25A23Q9BV35 468 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 GOLPH3Q9H4A6 298 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 NMUR1Q9HB89 426 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 RRAGDQ9NQL2 400 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 DDIT4Q9NX09 232 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 TXNDC16Q9P2K2 825 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 PCSK1NQ9UHG2 260 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 SLC12A6Q9UHW9 1150 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 RNF150Q9ULK6 438 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 TMCC3Q9ULS5 477 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 PACSIN2Q9UNF0 486 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 HBS1LQ9Y450 684 aaKnown RBP4.39□□□□□ -1.71
CCDC39-202ENST00000471307 CLUHO75153 1309 aa4.39□□□□□ -1.71
CCDC39-202ENST00000471307 DENND4CQ5VZ89 1909 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 ANAPC1Q9H1A4 1944 aa4.38□□□□□ -1.71
CCDC39-202ENST00000471307 DOCK6Q96HP0 2047 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms