RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TNIP2Q8NFZ5 429 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 OR2M3Q8NG83 312 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 OR4K17Q8NGC6 315 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 OR5M1Q8NGP8 315 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 RNF138Q8WVD3 245 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 OR5P2Q8WZ92 322 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 MS4A4EQ96PG1 132 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 DUSP26Q9BV47 211 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 OR2B2Q9GZK3 357 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 PRDM14Q9GZV8 571 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 RUBCNLQ9H714 662 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 CXorf36Q9H7Y0 433 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 SDHAF3Q9NRP4 125 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 ATAD3AQ9NVI7 634 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 NOP53Q9NZM5 478 aaKnown RBP10.49□□□□□ -0.73
CDHR3-205ENST00000468143 NTMQ9P121 344 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 DKKL1Q9UK85 242 aa10.49□□□□□ -0.73
CDHR3-205ENST00000468143 SPTAN1Q13813 2472 aaKnown RBP10.49□□□□□ -0.73
CDHR3-205ENST00000468143 TTC36A6NLP5 189 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 ZIC3O60481 467 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 KCNK2O95069 426 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 ACTL6AO96019 429 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 HMGN2P05204 90 aaKnown RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 KITP10721 976 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 HK1P19367 917 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 PTGER4P35408 488 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 GCKP35557 465 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 CCT3P49368 545 aaKnown RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 PRIM2P49643 509 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 CLK3P49761 638 aaKnown RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 AGFG1P52594 562 aaKnown RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 PSMD4P55036 377 aaKnown RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 NME5P56597 212 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 PRR5P85299 388 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 TP53BP2Q13625 1128 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 CASP8Q14790 479 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 LASP1Q14847 261 aaKnown RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 RIPPLY2Q5TAB7 128 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 OR4F3Q6IEY1 312 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 IFNEQ86WN2 208 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 PM20D2Q8IYS1 436 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 CLECL1Q8IZS7 167 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 ZNF295-AS1Q8N0V1 137 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 GATSQ8NAP1 163 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 NAXEQ8NCW5 288 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 OR4C3Q8NH37 302 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 OR5AK3PQ8NH89 298 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 HOXB13Q92826 284 aaPredicted RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 CDS1Q92903 461 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 TLCD1Q96CP7 247 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 SFXN2Q96NB2 322 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 TUBA1CQ9BQE3 449 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 TBL1XR1Q9BZK7 514 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 NKIRAS1Q9NYS0 192 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 MARCOQ9UEW3 520 aaPredicted RBP10.48□□□□□ -0.73
CDHR3-205ENST00000468143 PCDHGB3Q9Y5G1 929 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 KCNE3Q9Y6H6 103 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 GTF3C1Q12789 2109 aa10.48□□□□□ -0.73
CDHR3-205ENST00000468143 NINQ8N4C6 2090 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 GOLGA8QA0A0J9YX86 632 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 GOLGA8OA6NCC3 632 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 HSPB2A8KAH6 182 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 GOLGA8NF8WBI6 632 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 H0Y3Z8 333 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 SNUPNO95149 360 aaKnown RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 CPSF4O95639 269 aaKnown RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 ANGPTL1O95841 491 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 LBPP18428 481 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 SOAT1P35610 550 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 RNF144AP50876 292 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 GFRA1P56159 465 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 DSCR4P56555 118 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 HBA1P69905 142 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 TFF3Q07654 80 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 SNTB1Q13884 538 aaKnown RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 HSPB2Q16082 182 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 SMU1Q2TAY7 513 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 LSM12Q3MHD2 195 aaKnown RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 ENPP6Q6UWR7 440 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 COX18Q8N8Q8 333 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 FADS6Q8N9I5 356 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 FAM110BQ8TC76 370 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 ARL8AQ96BM9 186 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 SPOCK3Q9BQ16 436 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 TRIM8Q9BZR9 551 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 DPY30Q9C005 99 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 BHLHE41Q9C0J9 482 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 ENKD1Q9H0I2 346 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 MANSC1Q9H8J5 431 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 FAM120CQ9NX05 1096 aaKnown RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 GIN1Q9NXP7 522 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 ASIC5Q9NY37 505 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 HAO1Q9UJM8 370 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 ABCG2Q9UNQ0 655 aa10.47□□□□□ -0.73
CDHR3-205ENST00000468143 SPTBN1Q01082 2364 aaKnown RBP10.47□□□□□ -0.73
CDHR3-205ENST00000468143 NCOA6Q14686 2063 aaPredicted RBP10.46□□□□□ -0.73
CDHR3-205ENST00000468143 ZNF407Q9C0G0 2248 aa10.46□□□□□ -0.73
CDHR3-205ENST00000468143 NPIPA5A0A0B4J1W7 369 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms