RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 C12orf65Q9H3J6 166 aaKnown RBP9.41□□□□□ -0.9
SSR3-205ENST00000467789 PTGES2Q9H7Z7 377 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 NTMQ9P121 344 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 PPP4R1LQ9P1A2 415 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 DKKL1Q9UK85 242 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 EDARQ9UNE0 448 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 L3MBTL1Q9Y468 752 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 TRAF6Q9Y4K3 522 aa9.41□□□□□ -0.9
SSR3-205ENST00000467789 H0Y3Z8 333 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 RCBTB2O95199 551 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 ZWINTO95229 277 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 HSPA4LO95757 839 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 CRHP06850 196 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 LINC00032P0C843 101 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 PEPDP12955 493 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 ZNF708P17019 499 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 TACR1P25103 407 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 DPP4P27487 766 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 ALDH3A1P30838 453 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 LCN1P31025 176 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 KIR2DL3P43628 341 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 LHX2P50458 406 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 ZNF136P52737 540 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 MANFP55145 182 aaKnown RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 DLX5P56178 289 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 EEFSECP57772 596 aaKnown RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 RPL38P63173 70 aaKnown RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 SORDQ00796 357 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 C17orf67Q0P5P2 114 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 GAB1Q13480 694 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 MLC1Q15049 377 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 PRSS53Q2L4Q9 553 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 UGT3A2Q3SY77 523 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 RFTN2Q52LD8 501 aaPredicted RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 ARL13AQ5H913 290 aaPredicted RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 SH2D4BQ5SQS7 431 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 DCST1Q5T197 706 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 ZCCHC12Q6PEW1 402 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 POMZP3Q6PJE2 187 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 DDIASQ8IXT1 998 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 MREGQ8N565 214 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 FADS6Q8N9I5 356 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
SSR3-205ENST00000467789 NAXEQ8NCW5 288 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 OR4K17Q8NGC6 315 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 OR4N2Q8NGD1 307 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 OR2W6PQ8NHA6 318 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 TCP10LQ8TDR4 215 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 FAM222BQ8WU58 562 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 TWIST2Q8WVJ9 160 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 SFXN2Q96NB2 322 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 SH3GL2Q99962 352 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 TUBB1Q9H4B7 451 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 STOML1Q9UBI4 398 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 FBXL2Q9UKC9 423 aa9.4□□□□□ -0.9
SSR3-205ENST00000467789 CELSR1Q9NYQ6 3014 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 SPG11Q96JI7 2443 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 ZIC3O60481 467 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 LYPLA1O75608 230 aaPredicted RBP9.39□□□□□ -0.91
SSR3-205ENST00000467789 NKX2-2O95096 273 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 SLU7O95391 586 aaKnown RBP9.39□□□□□ -0.91
SSR3-205ENST00000467789 NGFRP08138 427 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 TMIGD3P0DMS9 266 aaPredicted RBP9.39□□□□□ -0.91
SSR3-205ENST00000467789 BCKDHAP12694 445 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 SNRPBP14678 240 aaKnown RBP9.39□□□□□ -0.91
SSR3-205ENST00000467789 UQCRC1P31930 480 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 HPCAL1P37235 193 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 MAP3K8P41279 467 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 DGKQP52824 942 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 KRTAP10-9P60411 292 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 PRR5P85299 388 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 OCRLQ01968 901 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 HSPB3Q12988 150 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 FLYWCH1Q4VC44 716 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 XKR7Q5GH72 579 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 OR2A2Q6IF42 318 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 SPNS3Q6ZMD2 512 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 CHMP1BQ7LBR1 199 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 ZNF551Q7Z340 670 aaPredicted RBP9.39□□□□□ -0.91
SSR3-205ENST00000467789 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 KIRREL3Q8IZU9 778 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 OR2T11Q8NH01 316 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 ZIM3Q96PE6 472 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 MS4A4EQ96PG1 132 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 TSSK3Q96PN8 268 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 TUBA1CQ9BQE3 449 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 TBL1XR1Q9BZK7 514 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 PIGMQ9H3S5 423 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 ATAD3AQ9NVI7 634 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 JKAMPQ9P055 326 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 SH3BP4Q9P0V3 963 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 SLC17A7Q9P2U7 560 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 CLCF1Q9UBD9 225 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 FIS1Q9Y3D6 152 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 PTGDR2Q9Y5Y4 395 aa9.39□□□□□ -0.91
SSR3-205ENST00000467789 IGLV3-32A0A0A0MS00 114 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms