RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 C9JVG2 144 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CLIC1O00299 241 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 UPK1AO00322 258 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ASNA1O43681 348 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 DDAH2O95865 285 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 IGKV3-11P04433 115 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CAPNS1P04632 268 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 HMGN2P05204 90 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 HPGDP15428 266 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 EFNA1P20827 205 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 CALB2P22676 271 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ITPKBP27987 946 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 IL12AP29459 219 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 IL12BP29460 328 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 LCN1P31025 176 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 GABRA3P34903 492 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CRATP43155 626 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 GIPRP48546 466 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CYB561P49447 251 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CDK9P50750 372 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 SSR4P51571 173 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 GPR143P51810 404 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 NR0B1P51843 470 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 WNT3P56703 355 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 SLC37A1P57057 533 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 POU6F2P78424 691 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 HPCAP84074 193 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 OC90Q02509 493 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 GABPB1Q06547 395 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 MGAT2Q10469 447 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CHAF1BQ13112 559 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 FADDQ13158 208 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 EFR3AQ14156 821 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 EXOSC7Q15024 291 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 LTB4RQ15722 352 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 MPEG1Q2M385 716 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 TRMT5Q32P41 509 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 SPATS1Q496A3 300 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ACER2Q5QJU3 275 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 LRIF1Q5T3J3 769 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 FAM69BQ5VUD6 431 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 SLC2A7Q6PXP3 512 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 HACD2Q6Y1H2 254 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CCDC121Q6ZUS5 278 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 C16orf62Q7Z3J2 963 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 DHDDSQ86SQ9 333 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 SLC44A2Q8IWA5 706 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 SLC30A8Q8IWU4 369 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CLECL1Q8IZS7 167 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ZADH2Q8N4Q0 377 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 METTL25Q8N6Q8 603 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ZNF615Q8N8J6 731 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 OR7G2Q8NG99 324 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 SNRNP27Q8WVK2 155 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 ASB15Q8WXK1 588 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 GTF2H4Q92759 462 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 PMM1Q92871 262 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 LRRC58Q96CX6 371 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 TMCO6Q96DC7 493 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 NEURL3Q96EH8 262 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 FAM120BQ96EK7 910 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 SLC35G5Q96KT7 338 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 SGCZQ96LD1 299 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 STACQ99469 402 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CGREF1Q99674 301 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 WDR77Q9BQA1 342 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 UTP23Q9BRU9 249 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 INPP5KQ9BT40 448 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 NUDT9Q9BW91 350 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 BTBD2Q9BX70 525 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 WWTR1Q9GZV5 400 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 HOXD1Q9GZZ0 328 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ADNPQ9H2P0 1102 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 PIGUQ9H490 435 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CDCP1Q9H5V8 836 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 ARMC7Q9H6L4 198 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CXorf36Q9H7Y0 433 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 TPT1P8Q9HAU6 139 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 IL1RL2Q9HB29 575 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CPNE5Q9HCH3 593 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 EQTNQ9NQ60 294 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 SDHAF3Q9NRP4 125 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 DUSP22Q9NRW4 184 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 CALML5Q9NZT1 146 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 PCDHGA9Q9Y5G4 932 aaKnown RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 CLDN16Q9Y5I7 305 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 HEMK1Q9Y5R4 338 aaPredicted RBP5.49□□□□□ -1.53
NUP98-208ENST00000461047 PTPRBP23467 1997 aa5.49□□□□□ -1.53
NUP98-208ENST00000461047 COL27A1Q8IZC6 1860 aaPredicted RBP5.48□□□□□ -1.53
NUP98-208ENST00000461047 A8MVJ9 347 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 B2RBV5 119 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 H3BNH8 94 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 DPM1O60762 260 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 SCN2BO60939 215 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 STX11O75558 287 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 ITGA10O75578 1167 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 REM1O75628 298 aa5.48□□□□□ -1.53
NUP98-208ENST00000461047 NKX2-2O95096 273 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms