RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 PLGRKTQ9HBL7 147 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 EQTNQ9NQ60 294 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF226Q9NYT6 803 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 TESQ9UGI8 421 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 RPL36Q9Y3U8 105 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 CSNK1G3Q9Y6M4 447 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 AGAP5A6NIR3 686 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 H0YIG0 161 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 M0R3G1 203 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 M0R3H8 397 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 CYP7B1O75881 506 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 NKX2-2O95096 273 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 ATE1O95260 518 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
ERCC3-205ENST00000460485 PVRP15151 417 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 ST6GAL1P15907 406 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 NT5EP21589 574 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 MAP3K8P41279 467 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TUBA1BP68363 451 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 POU6F2P78424 691 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-205ENST00000460485 CHRNEQ04844 493 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TSPAN31Q12999 210 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
ERCC3-205ENST00000460485 NR1D2Q14995 579 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 LTB4RQ15722 352 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 MOGQ16653 247 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF750Q32MQ0 723 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 C14orf28Q4W4Y0 310 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 DCST2Q5T1A1 773 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
ERCC3-205ENST00000460485 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 PODNL1Q6PEZ8 512 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TUBA1AQ71U36 451 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 RRM2BQ7LG56 351 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF438Q7Z4V0 828 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 RNF113BQ8IZP6 322 aaKnown RBP13.15□□□□□ -0.3
ERCC3-205ENST00000460485 OR4D11Q8NGI4 311 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 SLC9A6Q92581 669 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 SLC35A4Q96G79 324 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 SDF2Q99470 211 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 LMF2Q9BU23 707 aaKnown RBP13.15□□□□□ -0.3
ERCC3-205ENST00000460485 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 ERVMER34-1Q9H9K5 563 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 MAN2C1Q9NTJ4 1040 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 C2orf42Q9NWW7 574 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 MAT2BQ9NZL9 334 aa13.15□□□□□ -0.3
ERCC3-205ENST00000460485 EML5Q05BV3 1969 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 GCN1Q92616 2671 aaKnown RBP13.14□□□□□ -0.31
ERCC3-205ENST00000460485 A0A1W2PPW3 197 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 FITM1A5D6W6 292 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 C4orf47A7E2U8 309 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 H3BN98 237 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 FGF17O60258 216 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 OR10H2O60403 315 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CTNSO60931 367 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CLPXO76031 633 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 INMTO95050 263 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CELA2BP08218 269 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-205ENST00000460485 ALPPL2P10696 532 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 ACP2P11117 423 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CDK4P11802 303 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 NID1P14543 1247 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 FPR3P25089 353 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 PSMB9P28065 219 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 STAT5AP42229 794 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-205ENST00000460485 GSSP48637 474 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 MASP1P48740 699 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 HSD17B7P56937 341 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 RPL6Q02878 288 aaKnown RBP13.14□□□□□ -0.31
ERCC3-205ENST00000460485 PIN1Q13526 163 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-205ENST00000460485 SERTAD2Q14140 314 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 IRF3Q14653 427 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 SEC23BQ15437 767 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CYP27C1Q4G0S4 372 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 YOD1Q5VVQ6 348 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-205ENST00000460485 SLC16A12Q6ZSM3 486 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 MRGPREQ86SM8 312 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 GALNT12Q8IXK2 581 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CYP4Z2PQ8N1L4 340 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 VWA5B2Q8N398 1253 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 SLC16A11Q8NCK7 471 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 LMX1AQ8TE12 382 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 CDS1Q92903 461 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 YIPF4Q9BSR8 244 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 EDEM2Q9BV94 578 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 PDE7BQ9NP56 450 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 NLGN3Q9NZ94 848 aa13.14□□□□□ -0.31
ERCC3-205ENST00000460485 RHCGQ9UBD6 479 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms