RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 TAPBPO15533 448 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 HCN1O60741 890 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 CTAG2O75638 210 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 GRAP2O75791 330 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 TNFSF13O75888 250 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 PDE5AO76074 875 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 S1PR2O95136 353 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 PARNO95453 639 aaKnown RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 MOSP00540 346 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 CSN3P07498 182 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 HRES1P13985 223 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 ERCC2P18074 760 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 EEF1B2P24534 225 aaKnown RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 GCKP35557 465 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 CHKAP35790 457 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 SLC26A3P40879 764 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 MAGEA6P43360 314 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 DHPSP49366 369 aaPredicted RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 MFAP4P55083 255 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 VAMP2P63027 116 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 CDKL1Q00532 357 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 GK2Q14410 553 aaPredicted RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 NRF1Q16656 503 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 UGCGQ16739 394 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 HAGHQ16775 308 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 CPTPQ5TA50 214 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 IL23RQ5VWK5 629 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 KLHL35Q6PF15 583 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 C1orf228Q6PIY5 440 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 TMEM136Q6ZRR5 245 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 VRK2Q86Y07 508 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 VSTM4Q8IW00 320 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 OR9A2Q8NGT5 310 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 LMX1AQ8TE12 382 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 LPGAT1Q92604 370 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 SAT2Q96F10 170 aaPredicted RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 GDAP1L1Q96MZ0 367 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 ERGIC2Q96RQ1 377 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 RAB40CQ96S21 281 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 SRSF8Q9BRL6 282 aaKnown RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 DDX47Q9H0S4 455 aaKnown RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 OSGEPL1Q9H4B0 414 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 CENPMQ9NSP4 180 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 PDRG1Q9NUG6 133 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 DNAJC11Q9NVH1 559 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 AIG1Q9NVV5 245 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 GPATCH2LQ9NWQ4 482 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 GIMAP2Q9UG22 337 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 IKZF2Q9UKS7 526 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 UBQLN1Q9UMX0 589 aaKnown RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 ARHGAP26Q9UNA1 814 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 RUVBL2Q9Y230 463 aaKnown RBP-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 SIGLEC9Q9Y336 463 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 MAD1L1Q9Y6D9 718 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 USP6P35125 1406 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 NSD2O96028 1365 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 PALLDQ8WX93 1383 aa-0.57□□□□□ -2.5
SNORD42B-201ENST00000458893 AFF2P51816 1311 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 TTC21BQ7Z4L5 1316 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 NUP214P35658 2090 aaPredicted RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 TRGV4A0A0C4DH28 118 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 ESYT2A0FGR8 921 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 HELTA6NFD8 242 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 H0YL77 283 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 POLR1CO15160 346 aaPredicted RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 RAD51BO15315 384 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 HCRTR1O43613 425 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 ZNF73O43830 326 aaPredicted RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 LUC7L3O95232 432 aaKnown RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 NAPSAO96009 420 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 IGHDP01880 384 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 HLA-DQA1P01909 254 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 IFIT2P09913 472 aaKnown RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 LINGO3P0C6S8 592 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 TLX1NBP0CAT3 122 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 HSPA1AP0DMV8 641 aaKnown RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 HSPA1BP0DMV9 641 aaKnown RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 C1GALT1C1LP0DN25 315 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 IGLL1P15814 213 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 GABRB1P18505 474 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 ADORA2BP29275 332 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 SHMT2P34897 504 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 MTIF2P46199 727 aaKnown RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 ASMTP46597 345 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 TUBP50607 506 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 CDH8P55286 799 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 CDH13P55290 713 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 PRMT2P55345 433 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 RAP1AP62834 184 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 SLC7A9P82251 487 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 MGAT3Q09327 533 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 BIKQ13323 160 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 KCNJ11Q14654 390 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 TAF12Q16514 161 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 SNAPC1Q16533 368 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 LACTB2Q53H82 288 aaPredicted RBP-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 IGSF11Q5DX21 431 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 CASC10Q5T4H9 136 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 DCAF12Q5T6F0 453 aa-0.58□□□□□ -2.5
SNORD42B-201ENST00000458893 ZNF620Q6ZNG0 422 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms