RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TNFSF10P50591 281 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 RASSF2P50749 326 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 EEFSECP57772 596 aaKnown RBP10.65□□□□□ -0.7
SCN9A-204ENST00000452182 ARG2P78540 354 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 ERICH5Q6P6B1 374 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 FIGNL1Q6PIW4 674 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 IL20RBQ6UXL0 311 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 LRRC74BQ6ZQY2 392 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 RTL4Q6ZR62 310 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 ZNF227Q86WZ6 799 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 PTOV1Q86YD1 416 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 SLC30A8Q8IWU4 369 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 CYP4Z2PQ8N1L4 340 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 ARHGAP24Q8N264 748 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 PAQR8Q8TEZ7 354 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 RNF138Q8WVD3 245 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 HGDQ93099 445 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 EFHD2Q96C19 240 aaPredicted RBP10.65□□□□□ -0.7
SCN9A-204ENST00000452182 TMCO6Q96DC7 493 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 WBP1Q96G27 269 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 REXO5Q96IC2 774 aaKnown RBP10.65□□□□□ -0.7
SCN9A-204ENST00000452182 ADOQ96SZ5 270 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 BCL2L10Q9HD36 194 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 SH2D2AQ9NP31 389 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 PCDHGB6Q9Y5F9 930 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 CHCHD2Q9Y6H1 151 aaPredicted RBP10.65□□□□□ -0.7
SCN9A-204ENST00000452182 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.71
SCN9A-204ENST00000452182 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.71
SCN9A-204ENST00000452182 ANKRD33BA6NCL7 494 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 FAM220BPB1ANY3 271 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 NPIPB9F8W1W9 429 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 FCMRO60667 390 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 UGT2B11O75310 529 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 NR2F1P10589 423 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 SFTPCP11686 197 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 ATP6V1C1P21283 382 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 CRISP3P54108 245 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 FBXW4P57775 412 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 RPP38P78345 283 aaKnown RBP10.64□□□□□ -0.71
SCN9A-204ENST00000452182 HPCAP84074 193 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 CDK6Q00534 326 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 OC90Q02509 493 aaPredicted RBP10.64□□□□□ -0.71
SCN9A-204ENST00000452182 VEZF1Q14119 521 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 OR1C1Q15619 314 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 SYPL1Q16563 259 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 CYP51A1Q16850 503 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 CCNJQ5T5M9 372 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 RINLQ6ZS11 566 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 DEFB107AQ8IZN7 70 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 ZADH2Q8N4Q0 377 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 ANKFN1Q8N957 763 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 C11orf65Q8NCR3 313 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 MDS2Q8NDY4 140 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 MAL2Q969L2 176 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 SLC7A6OSQ96CW6 309 aaPredicted RBP10.64□□□□□ -0.71
SCN9A-204ENST00000452182 BTBD10Q9BSF8 475 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 HOXD1Q9GZZ0 328 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 ALG2Q9H553 416 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 UBQLN4Q9NRR5 601 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 FBXO34Q9NWN3 711 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 ANKRD10Q9NXR5 420 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 PLA2G3Q9NZ20 509 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 CNIH4Q9P003 139 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 ABCG2Q9UNQ0 655 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 DSPPQ9NZW4 1301 aa10.64□□□□□ -0.71
SCN9A-204ENST00000452182 A0A0G2JPF8 293 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 HNRNPCL2B2RXH8 293 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 HNRNPCL3B7ZW38 293 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 SLC28A2O43868 658 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 HS6ST1O60243 411 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 KIAA0513O60268 411 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 DPM1O60762 260 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 H6PDO95479 791 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 PDGFAP04085 211 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 BCHEP06276 602 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 CHRM4P08173 479 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 FAM87AP0C7U9 286 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 HNRNPCL4P0DMR1 293 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 CYP4B1P13584 511 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 HSD17B1P14061 328 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 TBXA2RP21731 343 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 PCGF2P35227 344 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 LIPEQ05469 1076 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 SNTA1Q13424 505 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 SCARB2Q14108 478 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 VMACQ2NL98 169 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 DNAL1Q4LDG9 190 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 GPAT3Q53EU6 434 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 SAMD4BQ5PRF9 694 aaKnown RBP10.63□□□□□ -0.71
SCN9A-204ENST00000452182 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 SLC22A10Q63ZE4 541 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 TYW3Q6IPR3 259 aaKnown RBP10.63□□□□□ -0.71
SCN9A-204ENST00000452182 REEP3Q6NUK4 255 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 BNC2Q6ZN30 1099 aaPredicted RBP10.63□□□□□ -0.71
SCN9A-204ENST00000452182 FRRS1Q6ZNA5 592 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 CCDC121Q6ZUS5 278 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 ZZZ3Q8IYH5 903 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 FAM13CQ8NE31 585 aa10.63□□□□□ -0.71
SCN9A-204ENST00000452182 HIPK4Q8NE63 616 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms