RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 RAB3CQ96E17 227 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 KCND1Q9NSA2 647 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 OAS1P00973 400 aaKnown RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SLC11A1P49279 550 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 NDST2P52849 883 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CMASQ8NFW8 434 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FAM213BQ8TBF2 198 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 C14orf79Q96F83 325 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 FAAP24Q9BTP7 215 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 SLC2A11Q9BYW1 496 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 PIGMQ9H3S5 423 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 TCAF1Q9Y4C2 921 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 CACNG2Q9Y698 323 aa8.52□□□□□ -1.05
NIPBL-202ENST00000448238 PRSS51A0A1B0GVH4 220 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 A0A1W2PQL4 384 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 GLUD1P00367 558 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 IL4RP24394 825 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MAOBP27338 520 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 ADARB1P78563 741 aaKnown RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 KDM4DQ6B0I6 523 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 DAZLQ92904 295 aaKnown RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 ZBTB8AQ96BR9 441 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 METTL2AQ96IZ6 378 aaKnown RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 NMNAT1Q9HAN9 279 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 UBQLN4Q9NRR5 601 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 COQ3Q9NZJ6 369 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 CLCF1Q9UBD9 225 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 GAB2Q9UQC2 676 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 CNTNAP4Q9C0A0 1308 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 KIAA0355O15063 1070 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 GPR39O43194 453 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 NTF3P20783 257 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TACR3P29371 465 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 BACE1P56817 501 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 GPM6BQ13491 265 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 PIN1Q13526 163 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 OR52E8Q6IFG1 317 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MRPL21Q7Z2W9 205 aaKnown RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 FIBINQ8TAL6 211 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SPPL2BQ8TCT7 592 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 DOHHQ9BU89 302 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SPHK1Q9NYA1 384 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 RIC1Q4ADV7 1423 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SLC9B1P1A6NJY1 282 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 K7ERQ8 282 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SLC16A6O15403 523 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TNFSF12O43508 249 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 DNPH1O43598 174 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 AOC2O75106 756 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 JRKO75564 520 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TXNDC12O95881 172 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MAS1P04201 325 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 RPS18P62269 152 aaKnown RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 IL17RDQ8NFM7 739 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 AKR1E2Q96JD6 320 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 PDGFDQ9GZP0 370 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SLC22A7Q9Y694 548 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM72A0PK05 275 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 PNMTP11086 282 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 RHOQP17081 205 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MTNR1AP48039 350 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SLBPQ14493 270 aaKnown RBP eCLIP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MFSD6LQ8IWD5 586 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MIB2Q96AX9 1013 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 INTS14Q96SY0 518 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 NOSIPQ9Y314 301 aaKnown RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 ASTN1O14525 1302 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MRC2Q9UBG0 1479 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SOX14O95416 240 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 UCN3Q969E3 161 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 GAS2L1Q99501 681 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 FBP1P09467 338 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 DRD5P21918 477 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 MAP2K6P52564 334 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 POU6F2P78424 691 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF33BQ06732 778 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 KCNJ8Q15842 424 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 CPXM2Q8N436 756 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 PRELID2Q8N945 189 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 BPIFCQ8NFQ6 507 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 DMBX1Q8NFW5 382 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 GPR22Q99680 433 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 SOX7Q9BT81 388 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 LHX5Q9H2C1 402 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 HRASLSQ9HDD0 168 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 COL15A1P39059 1388 aa8.51□□□□□ -1.05
NIPBL-202ENST00000448238 UNC119BA6NIH7 251 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 G3V3Q6 166 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TSPAN6O43657 245 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM11P17152 192 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms