RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 REXO1L1PQ8IX06 675 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 KLHDC8BQ8IXV7 354 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TAGAPQ8N103 731 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 FAM47BQ8NA70 645 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 OR52K1Q8NGK4 314 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 OR13J1Q8NGT2 312 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TFB1MQ8WVM0 346 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 NEIL1Q96FI4 390 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 MRFAP1L1Q96HT8 127 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 FBXL20Q96IG2 436 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 FAR2Q96K12 515 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 PANX3Q96QZ0 392 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GAL3ST4Q96RP7 486 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 CD244Q9BZW8 370 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GBA3Q9H227 469 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 FOLH1BQ9HBA9 442 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GALNT9Q9HCQ5 603 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 CCDC177Q9NQR7 707 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 TESQ9UGI8 421 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 ASIC3Q9UHC3 531 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 IP6K2Q9UHH9 426 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 MRPS33Q9Y291 106 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 HEATR1Q9H583 2144 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 TRBC2A0A5B9 178 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 URADA6NGE7 173 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 PRMT5O14744 637 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 PJA2O43164 708 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 OR1F1O43749 312 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 AIFM1O95831 613 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ABCB1P08183 1280 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 CSF1P09603 554 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 CDH1P12830 882 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 DAOP14920 347 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 AGTR1P30556 359 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 AHRP35869 848 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GJC1P36383 396 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 HNF4AP41235 474 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TMED10P49755 219 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 CLDN20P56880 219 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 PROK1P58294 105 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 RPP38P78345 283 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 IGLV3-21P80748 117 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 STX4Q12846 297 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ITGADQ13349 1161 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 KCNJ11Q14654 390 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 EFTUD2Q15029 972 aaKnown RBP eCLIP2.82□□□□□ -1.96
PMS1-215ENST00000447232 CT47A1Q5JQC4 288 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 TIMM23BQ5SRD1 257 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 DEPDC1Q5TB30 811 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 PPP4R4Q6NUP7 873 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 MFSD12Q6NUT3 480 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ALKBH5Q6P6C2 394 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 RAD9BQ6WBX8 426 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 DGAT2L6Q6ZPD8 337 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 BHLHA15Q7RTS1 189 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 IRF2BP2Q7Z5L9 587 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 C17orf64Q86WR6 236 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SPATA6LQ8N4H0 392 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 MUC7Q8TAX7 377 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SGCDQ92629 289 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 HGDQ93099 445 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TTC1Q99614 292 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GPA33Q99795 319 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 OSBPL11Q9BXB4 747 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 PCBD2Q9H0N5 130 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SNX15Q9NRS6 342 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GLRX2Q9NS18 164 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.82□□□□□ -1.96
PMS1-215ENST00000447232 GPRC5BQ9NZH0 403 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 FBXL2Q9UKC9 423 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TRAF6Q9Y4K3 522 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 A0A0G2JMP0 313 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 A0A0X1KG70 313 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SYCE3A1L190 88 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 MYO1FO00160 1098 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 LDB3O75112 727 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SEC14L2O76054 403 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 PGM3O95394 542 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 GOT2P00505 430 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 PLGP00747 810 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 ADAP00813 363 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SERPINA6P08185 405 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ZFXP17010 805 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 ZNF17P17021 662 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 DDX5P17844 614 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 RPS3P23396 243 aaKnown RBP eCLIP2.81□□□□□ -1.96
PMS1-215ENST00000447232 PCGF2P35227 344 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 STT3AP46977 705 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 NR2C2P49116 596 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 PPOXP50336 477 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 IDH3GP51553 393 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 NEK2P51955 445 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 LIM2P55344 173 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 LMO4P61968 165 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SNRPD2P62316 118 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 BTN3A2P78410 334 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 CD69Q07108 199 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 TOP3AQ13472 1001 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 RNF151Q2KHN1 245 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms