RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 OTUB1Q96FW1 271 aaPredicted RBP12.29□□□□□ -0.44
DDX56-206ENST00000446987 DPH7Q9BTV6 452 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 EDEM2Q9BV94 578 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 RBCK1Q9BYM8 510 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 SLC29A3Q9BZD2 475 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 RNF32Q9H0A6 362 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 OR51J1Q9H342 316 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 IL21RQ9HBE5 538 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 SDHAF3Q9NRP4 125 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 SIRT5Q9NXA8 310 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 MS4A12Q9NXJ0 267 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 DUX4Q9UBX2 424 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 MLXQ9UH92 298 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 ZNF222Q9UK12 451 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 ING1Q9UK53 422 aaPredicted RBP12.29□□□□□ -0.44
DDX56-206ENST00000446987 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 SPEGQ15772 3267 aa12.29□□□□□ -0.44
DDX56-206ENST00000446987 TRAV20A0A0B4J274 112 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 WRBO00258 174 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 SLC28A1O00337 649 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 CDRT1O95170 752 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 RASGRP1O95267 797 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 ZNF3P17036 446 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
DDX56-206ENST00000446987 POU1F1P28069 291 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 AKT2P31751 481 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 CDKN2DP55273 166 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 HNRNPA0Q13151 305 aaKnown RBP12.28□□□□□ -0.44
DDX56-206ENST00000446987 SHBQ15464 509 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 SPHARQ15513 63 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 OR4D1Q15615 310 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 CBLL1Q75N03 491 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 TMPRSS9Q7Z410 1059 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 GLCCI1Q86VQ1 547 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 IQCHQ86VS3 1027 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 RBM14Q96PK6 669 aaKnown RBP12.28□□□□□ -0.44
DDX56-206ENST00000446987 MNTQ99583 582 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 ADGRE3Q9BY15 652 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 DERL2Q9GZP9 239 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
DDX56-206ENST00000446987 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 RAD18Q9NS91 495 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 IMP3Q9NV31 184 aaKnown RBP12.28□□□□□ -0.44
DDX56-206ENST00000446987 CLN6Q9NWW5 311 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 SLC2A6Q9UGQ3 507 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
DDX56-206ENST00000446987 HS3ST3A1Q9Y663 406 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 CABIN1Q9Y6J0 2220 aa12.28□□□□□ -0.44
DDX56-206ENST00000446987 LOC102723532A0A0G2JNH3 316 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 H3BM21 787 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 PDCD5O14737 125 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 EIF1BO60739 113 aaKnown RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 SLC19A2O60779 497 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 S1PR4O95977 384 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 HOXB9P17482 250 aaPredicted RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 HLA-DPA1P20036 260 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 EIF1P41567 113 aaKnown RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 STARP49675 285 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 SGCGQ13326 291 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 OPCMLQ14982 345 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 MPEG1Q2M385 716 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 ZNF789Q5FWF6 425 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 HES5Q5TA89 166 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 C5orf46Q6UWT4 87 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 MSANTD1Q6ZTZ1 278 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 PROKR2Q8NFJ6 384 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 NUS1Q96E22 293 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 TBATAQ96M53 351 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 UBL7Q96S82 380 aaPredicted RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 ISYNA1Q9NPH2 558 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 SEMA4BQ9NPR2 832 aaPredicted RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 TXNL4BQ9NX01 149 aaKnown RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 IMPAD1Q9NX62 359 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 PCTPQ9UKL6 214 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 SLC6A5Q9Y345 797 aa12.27□□□□□ -0.44
DDX56-206ENST00000446987 TDRD6O60522 2096 aaKnown RBP12.27□□□□□ -0.44
DDX56-206ENST00000446987 ISM1B1AKI9 464 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 HNRNPCL2B2RXH8 293 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 TLR4O00206 839 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 CCNB2O95067 398 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 PCCBP05166 539 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 FGF1P05230 155 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 THEGLP0DJG4 465 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 UGT2B7P16662 529 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 S100PP25815 95 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 AGFG1P52594 562 aaKnown RBP12.27□□□□□ -0.45
DDX56-206ENST00000446987 C1DQ13901 141 aaKnown RBP12.27□□□□□ -0.45
DDX56-206ENST00000446987 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 HFEQ30201 348 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 FAM219BQ5XKK7 198 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 MZT2AQ6P582 158 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 CNIH2Q6PI25 160 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 PGAP1Q75T13 922 aa12.27□□□□□ -0.45
DDX56-206ENST00000446987 SCAMP4Q969E2 229 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms