RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ZNF471Q9BX82 626 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 C20orf85Q9H1P6 137 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 PURGQ9UJV8 347 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 PRSS21Q9Y6M0 314 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ZNF142P52746 1687 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 PLSCR5A0PG75 271 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 C17orf102A2RUQ5 167 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 MCRIP1C9JLW8 97 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 FFAR1O14842 300 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 POMCP01189 267 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 LIPJQ5W064 366 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 SFXN4Q6P4A7 337 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 APOBEC3FQ8IUX4 373 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 PIGMQ9H3S5 423 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 XKR8Q9H6D3 395 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 PLEKHA6Q9Y2H5 1048 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 OR10H1Q9Y4A9 318 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 CH25HO95992 272 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 HNF1BP35680 557 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ENTPD8Q5MY95 495 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 PSAPL1Q6NUJ1 521 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 CPNE2Q96FN4 548 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 SENP5Q96HI0 755 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 ALG8Q9BVK2 526 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 BHLHE41Q9C0J9 482 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 A4GALTQ9NPC4 353 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 GFOD1Q9NXC2 390 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 UPB1Q9UBR1 384 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 A0A0D9SG52 128 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 MTMR11A4FU01 709 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 UGDHO60701 494 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 GPR32O75388 356 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ATG12O94817 140 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ABCA1O95477 2261 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 NMBP08949 121 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 PAICSP22234 425 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 SPAM1P38567 509 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 EPHA4P54764 986 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 TAF10Q12962 218 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 C16orf59Q7L2K0 433 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ING1Q9UK53 422 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 BACE2Q9Y5Z0 518 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 HIST1H2ABP04908 130 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 S100A2P29034 98 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 OR10A3P58181 314 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 CAMKVQ8NCB2 501 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 C16orf78Q8WTQ4 265 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 SFT2D1Q8WV19 159 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 HIST1H2ACQ93077 130 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 INTS12Q96CB8 462 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 INPP5EQ9NRR6 644 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 EVPLQ92817 2033 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 DDX60LQ5H9U9 1706 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 RPS10-NUDT3A0A1W2PQS6 291 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ACOT7O00154 380 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 SMPD1P17405 629 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 BOP1Q14137 746 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 ZCCHC12Q6PEW1 402 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 PNPLA2Q96AD5 504 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 CXorf58Q96LI9 332 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 PFDN5Q99471 154 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 CMSS1Q9BQ75 279 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 LGR4Q9BXB1 951 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 IRAK3Q9Y616 596 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 HEATR5BQ9P2D3 2071 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 F5H0A9 414 aaPredicted RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 CATP04040 527 aaKnown RBP4.73□□□□□ -1.65
HERC1-201ENST00000443617 HTR1FP30939 366 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 GDNFP39905 211 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 MVDP53602 400 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 C6orf132Q5T0Z8 1188 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 CD300LDQ6UXZ3 194 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ZNF546Q86UE3 836 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 SKA3Q8IX90 412 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 GPC2Q8N158 579 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ARHGAP9Q9BRR9 750 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 SLITRK2Q9H156 845 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 WNT1P04628 370 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 EPCAMP16422 314 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ACSM3Q53FZ2 586 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 VASNQ6EMK4 673 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ADCK2Q7Z695 626 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ASPGQ86U10 573 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 BBS4Q96RK4 519 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 TMEM30AQ9NV96 361 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 GLI3P10071 1580 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 ROBO1Q9Y6N7 1651 aa4.73□□□□□ -1.65
HERC1-201ENST00000443617 SERPIND1P05546 499 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 URODP06132 367 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 PTAFRP25105 342 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 SLC6A11P48066 632 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 C5orf46Q6UWT4 87 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 C11orf96Q7Z7L8 435 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 OR5D16Q8NGK9 328 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 SPRYD4Q8WW59 207 aaPredicted RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 EXO5Q9H790 373 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 HEPACAM2A8MVW5 462 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 IFNGP01579 166 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms