RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 LIN52Q52LA3 116 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 C3orf38Q5JPI3 329 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 PAPD4Q6PIY7 484 aaKnown RBP18.7■□□□□ 0.58
VRK2-207ENST00000440705 BCORP1Q8N888 145 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 NFAM1Q8NET5 270 aaPredicted RBP18.7■□□□□ 0.58
VRK2-207ENST00000440705 OR2Y1Q8NGV0 311 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 VANGL1Q8TAA9 524 aaPredicted RBP18.7■□□□□ 0.58
VRK2-207ENST00000440705 SPRY4Q9C004 299 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 SEMA4CQ9C0C4 833 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 VNN3Q9NY84 501 aa18.7■□□□□ 0.58
VRK2-207ENST00000440705 A0A1W2PNU3 283 aaPredicted RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 EPPINO95925 133 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 NID1P14543 1247 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 YAP1P46937 504 aaKnown RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 PSMD4P55036 377 aaKnown RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 SPIBQ01892 262 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 GK3PQ14409 553 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.69■□□□□ 0.58
VRK2-207ENST00000440705 CMPK2Q5EBM0 449 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 WLSQ5T9L3 541 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 TCTN3Q6NUS6 607 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 TBPL2Q6SJ96 375 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 TMEM179BQ7Z7N9 219 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 COMTD1Q86VU5 262 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 C9orf40Q8IXQ3 194 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 ZSCAN1Q8NBB4 408 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 C17orf47Q8NEP4 570 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 MAGEE2Q8TD90 523 aaPredicted RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 GAL3ST4Q96RP7 486 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 ARHGDIGQ99819 225 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 RBM4BQ9BQ04 359 aaKnown RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 RBM4Q9BWF3 364 aaKnown RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 B3GNT4Q9C0J1 378 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 WWTR1Q9GZV5 400 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 NXF5Q9H1B4 397 aaKnown RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 TESMINQ9Y4I5 508 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 PCDHGA10Q9Y5H3 936 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 M0R3H8 397 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 TNFRSF11BO00300 401 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 UGT2B17O75795 530 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 HPRP00739 348 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 IGKV1D-16P01601 117 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 ALDH3A2P51648 485 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 PSPHP78330 225 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 PPP1R8Q12972 351 aaKnown RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 DAG1Q14118 895 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 MAPK14Q16539 360 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 DEF8Q6ZN54 512 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 ZNF605Q86T29 641 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 OR4D11Q8NGI4 311 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 VMP1Q96GC9 406 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 WDR77Q9BQA1 342 aaPredicted RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 Q9H521 79 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 RAB26Q9ULW5 256 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 MAGED1Q9Y5V3 778 aaPredicted RBP18.69■□□□□ 0.58
VRK2-207ENST00000440705 LYVE1Q9Y5Y7 322 aa18.69■□□□□ 0.58
VRK2-207ENST00000440705 MUC6Q6W4X9 2439 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 LOC102723996A0A087X1L8 192 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 C7orf72A4D263 438 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 J3KTA2 159 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 PEX12O00623 359 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 IGHEP01854 428 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 RAB40ALP0C0E4 278 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 UQCRBP14927 111 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 FOLR3P41439 243 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 HMGA2P52926 109 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 CDH12P55289 794 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 SMIM11AP58511 58 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 EEF1A1P68104 462 aaKnown RBP18.68■□□□□ 0.58
VRK2-207ENST00000440705 RNF220Q5VTB9 566 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 HSDL2Q6YN16 418 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 ZNF836Q6ZNA1 936 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 ZAR1Q86SH2 424 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 TMPRSS12Q86WS5 348 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 RBM45Q8IUH3 476 aaKnown RBP18.68■□□□□ 0.58
VRK2-207ENST00000440705 LACC1Q8IV20 430 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 CLIP4Q8N3C7 705 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 APCDD1LQ8NCL9 501 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 OR6T1Q8NGN1 323 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 NAF1Q96HR8 494 aaKnown RBP18.68■□□□□ 0.58
VRK2-207ENST00000440705 OSBPL11Q9BXB4 747 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 EVA1AQ9H8M9 152 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 KCNE5Q9UJ90 142 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 KCND3Q9UK17 655 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 CHST2Q9Y4C5 530 aa18.68■□□□□ 0.58
VRK2-207ENST00000440705 TO15178 435 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 GADD45GO95257 159 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 IL33O95760 270 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 ALPLP05186 524 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 UMODP07911 640 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 CEACAM1P13688 526 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 ATP12AP54707 1039 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 RNF4P78317 190 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 TARDBPQ13148 414 aaKnown RBP eCLIP18.67■□□□□ 0.58
VRK2-207ENST00000440705 ZNF141Q15928 474 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 ZSWIM7Q19AV6 140 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 COLEC12Q5KU26 742 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 ASCL5Q7RTU5 278 aa18.67■□□□□ 0.58
VRK2-207ENST00000440705 TIPARPQ7Z3E1 657 aaKnown RBP18.67■□□□□ 0.58
VRK2-207ENST00000440705 HS3ST5Q8IZT8 346 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms