RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZNF33BQ06732 778 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 AANATQ16613 207 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ZNF770Q6IQ21 691 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 HDDC2Q7Z4H3 204 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 CDK20Q8IZL9 346 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR2T33Q8NG76 320 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR56A3Q8NH54 315 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 OSTF1Q92882 214 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 NEURL3Q96EH8 262 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 CHFRQ96EP1 664 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 SENP5Q96HI0 755 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 SYT17Q9BSW7 474 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 LRRN3Q9H3W5 708 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 XKR8Q9H6D3 395 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ZNF334Q9HCZ1 680 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR51B4Q9Y5P0 310 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 TNS1Q9HBL0 1735 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 SHISA3A0PJX4 238 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 LGALS8O00214 317 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 STK25O00506 426 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 PLPP1O14494 284 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ARPC5O15511 151 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ERI3O43414 337 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 ENPP1P22413 925 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 FKBP1BP68106 108 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 COL28A1Q2UY09 1125 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 KHDRBS2Q5VWX1 349 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 IKBIPQ70UQ0 350 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 BOLLQ8N9W6 283 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR11H4Q8NGC9 324 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR13C5Q8NGS8 318 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 MOSPD2Q8NHP6 518 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 RBPMSQ93062 196 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 PRRC1Q96M27 445 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ZSWIM3Q96MP5 696 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 DPH1Q9BZG8 443 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 RNF32Q9H0A6 362 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 KRCC1Q9NPI7 259 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 ZSCAN32Q9NX65 697 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 A4GNTQ9UNA3 340 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 FAM86C2PA6NEL3 165 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ARPC1BO15143 372 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 MAGEB4O15481 346 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 RNF13O43567 381 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 PIP5K1CO60331 668 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 FMO6PO60774 539 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 PSMA3P25788 255 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 HOXC8P31273 242 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ARHGDIBP52566 201 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 CLDN2P57739 230 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 PSMA6P60900 246 aaKnown RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 NDUFAF5Q5TEU4 345 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 FAM46CQ5VWP2 391 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 PYHIN1Q6K0P9 492 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 SFXN4Q6P4A7 337 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 LRRTM4Q86VH4 590 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 SLITRK4Q8IW52 837 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR5M3Q8NGP4 307 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 OR5W2Q8NH69 310 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ACOT12Q8WYK0 555 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 TFGQ92734 400 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 ABHD1Q96SE0 405 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ARL6Q9H0F7 186 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 SAV1Q9H4B6 383 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 ZDHHC4Q9NPG8 344 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 MARK1Q9P0L2 795 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 RCE1Q9Y256 329 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 NUBP2Q9Y5Y2 271 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 ZSWIM8A7E2V4 1837 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 PSMD9O00233 223 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 SEMA7AO75326 666 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 MT-ND5P03915 603 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 IFNA16P05015 189 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 FUT1P19526 365 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 RAB3BP20337 219 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 NAA10P41227 235 aaPredicted RBP8.49□□□□□ -1.05
COPB1-202ENST00000439561 VEGFCP49767 419 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 CRHR2Q13324 411 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 GNA13Q14344 377 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 CDKN3Q16667 212 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 TMEM201Q5SNT2 666 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 NKAIN4Q8IVV8 208 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 TBC1D19Q8N5T2 526 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 TRAM1L1Q8N609 369 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 OR8D4Q8NGM9 314 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 C1orf216Q8TAB5 229 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 SNX33Q8WV41 574 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 ALG14Q96F25 216 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 METTL2AQ96IZ6 378 aaKnown RBP8.49□□□□□ -1.05
COPB1-202ENST00000439561 DPH7Q9BTV6 452 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 PPA2Q9H2U2 334 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 BABAM2Q9NXR7 383 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 NLGN3Q9NZ94 848 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 GTF2A1LQ9UNN4 478 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 CNTRLQ7Z7A1 2325 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 A0A1W2PRQ8 180 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 NDUFS4O43181 175 aa8.49□□□□□ -1.05
COPB1-202ENST00000439561 HOXA2O43364 376 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms