RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GPR160Q9UJ42 338 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 C2orf92A0A1B0GVN3 265 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 GAPDHSO14556 408 aaPredicted RBP14.88□□□□□ -0.03
DHFR-201ENST00000439211 CCL16O15467 120 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 PTAFRP25105 342 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 TRAM2Q15035 370 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 LIPJQ5W064 366 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 RAET1GQ6H3X3 334 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 ZNF730Q6ZMV8 503 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 SCARB1Q8WTV0 552 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 ESRP2Q9H6T0 727 aaKnown RBP14.88□□□□□ -0.03
DHFR-201ENST00000439211 HEXA-AS1Q9H8Q6 139 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 PURGQ9UJV8 347 aaKnown RBP14.88□□□□□ -0.03
DHFR-201ENST00000439211 MYO9BQ13459 2157 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 TRABD2BA6NFA1 517 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 TUBAL3A6NHL2 446 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 ZNF879B4DU55 563 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 CRYBB2P43320 205 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 KRT33BQ14525 404 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 TPGS2Q68CL5 300 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 LYPD4Q6UWN0 246 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 CALHM3Q86XJ0 350 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 OR10K1Q8NGX5 313 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 XAGE5Q8WWM1 108 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 PDXPQ96GD0 296 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 GAL3ST1Q99999 423 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 CDCA4Q9BXL8 241 aa14.88□□□□□ -0.03
DHFR-201ENST00000439211 ZFR2Q9UPR6 939 aaKnown RBP14.88□□□□□ -0.03
DHFR-201ENST00000439211 TMEM202A6NGA9 273 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 PGBD2Q6P3X8 592 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 BEND4Q6ZU67 534 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 ZSCAN1Q8NBB4 408 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 DLL4Q9NR61 685 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 CFAP20Q9Y6A4 193 aaKnown RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 CD8B2A6NJW9 211 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 SULT1C2O00338 296 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 EGFP01133 1207 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 CD8BP10966 210 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 GPX2P18283 190 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 RPS25P62851 125 aaKnown RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 SELENOWP63302 87 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 HBA1P69905 142 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 OC90Q02509 493 aaPredicted RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 SGCAQ16586 387 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 MPEG1Q2M385 716 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 COX20Q5RI15 118 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 PLEKHS1Q5SXH7 462 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 FAM124AQ86V42 546 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 LURAP1Q96LR2 239 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 C7orf50Q9BRJ6 194 aaKnown RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 OR10A4Q9H209 315 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 TREM1Q9NP99 234 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 PLEKHB1Q9UF11 243 aaPredicted RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 ATXN7L1Q9ULK2 861 aaPredicted RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 C1orf196B1AJZ1 125 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 KHDRBS3O75525 346 aaKnown RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 EIF3GO75821 320 aaKnown RBP eCLIP14.87□□□□□ -0.03
DHFR-201ENST00000439211 PPM1FP49593 454 aaPredicted RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 BLOC1S1P78537 153 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 RIPPLY1Q0D2K3 151 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 CAMK2DQ13557 499 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 OR2G6Q5TZ20 316 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 SLC27A4Q6P1M0 643 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 ZNF852Q6ZMS4 543 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 ZNF551Q7Z340 670 aaPredicted RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 BCDIN3DQ7Z5W3 292 aaKnown RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 PTOV1Q86YD1 416 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 TMEM25Q86YD3 366 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 CBARPQ8N350 705 aaPredicted RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 UBTD2Q8WUN7 234 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 ZC3HAV1LQ96H79 300 aaKnown RBP14.87□□□□□ -0.03
DHFR-201ENST00000439211 DEFB118Q96PH6 123 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 MAPKAP1Q9BPZ7 522 aa14.87□□□□□ -0.03
DHFR-201ENST00000439211 UBE2QL1A1L167 161 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 NARSO43776 548 aaKnown RBP14.86□□□□□ -0.03
DHFR-201ENST00000439211 PRMT3O60678 531 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 BCHEP06276 602 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 CTSCP53634 463 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 B4GALNT1Q00973 533 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 GAB1Q13480 694 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 COL9A2Q14055 689 aaPredicted RBP14.86□□□□□ -0.03
DHFR-201ENST00000439211 HEPACAMQ14CZ8 416 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 CA5BP1Q8WTZ4 195 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 OR2AG1Q9H205 316 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 BABAM2Q9NXR7 383 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 STOX2Q9P2F5 926 aaPredicted RBP14.86□□□□□ -0.03
DHFR-201ENST00000439211 AUP1Q9Y679 476 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 FAM227AF5H4B4 570 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 DNASE2O00115 360 aaPredicted RBP14.86□□□□□ -0.03
DHFR-201ENST00000439211 LEFTY1O75610 366 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 S100A8P05109 93 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 NMBP08949 121 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 TIA1P31483 386 aaKnown RBP eCLIP14.86□□□□□ -0.03
DHFR-201ENST00000439211 GPR1P46091 355 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 EVX1P49640 407 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 CRISP1P54107 249 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 ZNF763Q0D2J5 394 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 SPIN4Q56A73 249 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 CEACAM20Q6UY09 585 aa14.86□□□□□ -0.03
DHFR-201ENST00000439211 NEIL2Q969S2 332 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms