RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
HERC3-206ENST00000431413 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
HERC3-206ENST00000431413 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 MSTNO14793 375 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 HCRTR2O43614 444 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 CD99P14209 185 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 GABRA3P34903 492 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 MANFP55145 182 aaKnown RBP13.71□□□□□ -0.21
HERC3-206ENST00000431413 RPS3AP61247 264 aaKnown RBP13.71□□□□□ -0.21
HERC3-206ENST00000431413 SLC18A2Q05940 514 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 C17orf67Q0P5P2 114 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 HSPB3Q12988 150 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 KIAA0040Q15053 153 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 GLYR1Q49A26 553 aaPredicted RBP13.71□□□□□ -0.21
HERC3-206ENST00000431413 RNF165Q6ZSG1 346 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 ZNF551Q7Z340 670 aaPredicted RBP13.71□□□□□ -0.21
HERC3-206ENST00000431413 C10orf107Q8IVU9 208 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 C4orf33Q8N1A6 199 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 DUSP19Q8WTR2 217 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 GFM2Q969S9 779 aaKnown RBP13.71□□□□□ -0.21
HERC3-206ENST00000431413 EGLN2Q96KS0 407 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 ALPK1Q96QP1 1244 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 LIME1Q9H400 295 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 REEP4Q9H6H4 257 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 EML4Q9HC35 981 aaKnown RBP13.71□□□□□ -0.21
HERC3-206ENST00000431413 TNFRSF12AQ9NP84 129 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 SH3BP4Q9P0V3 963 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 FIS1Q9Y3D6 152 aa13.71□□□□□ -0.21
HERC3-206ENST00000431413 MED13LQ71F56 2210 aa13.71□□□□□ -0.22
HERC3-206ENST00000431413 A0A1W2PNV4 684 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 TLDC2A0PJX2 215 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 A8MXE2 369 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 TBX19O60806 448 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 TNFRSF21O75509 655 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 UTS2O95399 124 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 TGM6O95932 706 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 RAF1P04049 648 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 ASMTP46597 345 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 B3GALT5-AS1P59052 145 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 KEAP1Q14145 624 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 FGFBP1Q14512 234 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 SZRD1Q7Z422 152 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 R3HCC1LQ7Z5L2 792 aaKnown RBP13.7□□□□□ -0.22
HERC3-206ENST00000431413 MARCH3Q86UD3 253 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
HERC3-206ENST00000431413 CNEP1R1Q8N9A8 125 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 CDRT4Q8N9R6 151 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 MTERF3Q96E29 417 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 C1GALT1C1Q96EU7 318 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 GATA5Q9BWX5 397 aaPredicted RBP13.7□□□□□ -0.22
HERC3-206ENST00000431413 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
HERC3-206ENST00000431413 EQTNQ9NQ60 294 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 ACSS1Q9NUB1 689 aaPredicted RBP13.7□□□□□ -0.22
HERC3-206ENST00000431413 MED12Q93074 2177 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 DOCK7Q96N67 2140 aa13.7□□□□□ -0.22
HERC3-206ENST00000431413 AKAP6Q13023 2319 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 TMEM114B3SHH9 223 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 AKAP10O43572 662 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
HERC3-206ENST00000431413 ANGPTL1O95841 491 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 LINC00032P0C843 101 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 SDC1P18827 310 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 MAPK1P28482 360 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 CPOXP36551 454 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 PRKAG1P54619 331 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 RPL38P63173 70 aaKnown RBP13.69□□□□□ -0.22
HERC3-206ENST00000431413 PRR5P85299 388 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 PCLAFQ15004 111 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 KANK2Q63ZY3 851 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 PLXDC2Q6UX71 529 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 Q6ZSR9 355 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 TGIF2LYQ8IUE0 185 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 DDIASQ8IXT1 998 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 NUP43Q8NFH3 380 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 SLC9A6Q92581 669 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 TSSK3Q96PN8 268 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 SLC39A3Q9BRY0 314 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 PINK1Q9BXM7 581 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 EIF3LQ9Y262 564 aaKnown RBP13.69□□□□□ -0.22
HERC3-206ENST00000431413 ZNF337Q9Y3M9 751 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 ZNF175Q9Y473 711 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 DNAJC15Q9Y5T4 150 aa13.69□□□□□ -0.22
HERC3-206ENST00000431413 ITPR3Q14573 2671 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 MTORP42345 2549 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 OR2M5A3KFT3 312 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 H3BML4 177 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 SEC14L5O43304 696 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 TNFSF13O75888 250 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 NKX2-2O95096 273 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 FGF4P08620 206 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 FCGR2AP12318 317 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 HPGDP15428 266 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 LCN1P31025 176 aa13.68□□□□□ -0.22
HERC3-206ENST00000431413 RPL3P39023 403 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms