RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PPP1R36Q96LQ0 422 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 YIPF4Q9BSR8 244 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 G6PC3Q9BUM1 346 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 DSN1Q9H410 356 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 PNPOQ9NVS9 261 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 FBXO34Q9NWN3 711 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 MED11Q9P086 117 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 KCNK2O95069 426 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 DPP4P27487 766 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 HPCAL1P37235 193 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 RFX3P48380 749 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 LHX2P50458 406 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 DIO3P55073 304 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 DLX5P56178 289 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 CLDN8P56748 225 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 C21orf58P58505 322 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 STX3Q13277 289 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 DUSP5Q16690 384 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 SMU1Q2TAY7 513 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 GRAMD1BQ3KR37 738 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 ADGRE4PQ86SQ3 457 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 GALNT10Q86SR1 603 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 CROCCP2Q86T23 111 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 LACC1Q8IV20 430 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 DMRTC2Q8IXT2 367 aaPredicted RBP16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 OR4C3Q8NH37 302 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 FBXO30Q8TB52 745 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZPLD1Q8TCW7 415 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 DUSP19Q8WTR2 217 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 OR5P2Q8WZ92 322 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 SLC9A6Q92581 669 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 OTUB1Q96FW1 271 aaPredicted RBP16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 MS4A4EQ96PG1 132 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 CALHM2Q9HA72 323 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 C3orf14Q9HBI5 128 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 FAM120CQ9NX05 1096 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 ASIC5Q9NY37 505 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 MRTO4Q9UKD2 239 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 ABCG2Q9UNQ0 655 aa16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 EIF3LQ9Y262 564 aaKnown RBP16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 RPH3AQ9Y2J0 694 aaPredicted RBP16.63■□□□□ 0.25
SMARCAL1-205ENST00000425815 CD8B2A6NJW9 211 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 HSPB2A8KAH6 182 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 FAM47E-STBD1D6RA91 191 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 C6orf47O95873 294 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 MYZAPP0CAP1 466 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 PRPS1L1P21108 318 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZNF136P52737 540 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 DSCR4P56555 118 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 KRTAP10-9P60411 292 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 PRR5P85299 388 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 BST1Q10588 318 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 HSPB2Q16082 182 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZCCHC12Q6PEW1 402 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 PLXDC2Q6UX71 529 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 GDF7Q7Z4P5 450 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 ANKRD42Q8N9B4 389 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 RELL2Q8NC24 303 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 TRIB1Q96RU8 372 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 TUBA1CQ9BQE3 449 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 PPP4R1LQ9P1A2 415 aa16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 PHF3Q92576 2039 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-205ENST00000425815 IGLV3-32A0A0A0MS00 114 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 MBD3L4A6NDZ8 208 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 MBD3L3A6NE82 208 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 MBD3L5A6NJ08 208 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 SNUPNO95149 360 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 KCNH1O95259 989 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 HMGN2P05204 90 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 TCEA1P23193 301 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 PSMD4P55036 377 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 CLDN15P56746 228 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 CLDN18P56856 261 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 SRYQ05066 204 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 STX5Q13190 355 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 SLC25A35Q3KQZ1 300 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 VPS26BQ4G0F5 336 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 FIGNL1Q6PIW4 674 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 CAMKMTQ7Z624 323 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 IFNEQ86WN2 208 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 C9orf106Q8NAJ2 232 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 OR4K17Q8NGC6 315 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 MBD3L2Q8NHZ7 208 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 TLCD1Q96CP7 247 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 C14orf79Q96F83 325 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 UCN2Q96RP3 112 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 PAIP2Q9BPZ3 127 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 BHLHE41Q9C0J9 482 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 TMBIM4Q9HC24 238 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZCCHC3Q9NUD5 404 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 GPATCH2Q9NW75 528 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 NOP53Q9NZM5 478 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 DKKL1Q9UK85 242 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 KCNE3Q9Y6H6 103 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 CSMD2Q7Z408 3487 aa16.61■□□□□ 0.25
SMARCAL1-205ENST00000425815 PDZD2O15018 2839 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms