RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 C1orf52Q8N6N3 182 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 PCYOX1LQ8NBM8 494 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SRFBP1Q8NEF9 429 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 NFAM1Q8NET5 270 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 MGARPQ8TDB4 240 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 HDAC2Q92769 488 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 NCLNQ969V3 563 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 NACC2Q96BF6 587 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ANKRD9Q96BM1 317 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 SDCCAG3Q96C92 435 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 OR14A2Q96R54 314 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CENPKQ9BS16 269 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 PTDSS2Q9BVG9 487 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 HES7Q9BYE0 225 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ALOXE3Q9BYJ1 711 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SLC29A3Q9BZD2 475 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ACPTQ9BZG2 426 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ROPN1BQ9BZX4 212 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 OR8D2Q9GZM6 311 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ROGDIQ9GZN7 287 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CDCP1Q9H5V8 836 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 RPF2Q9H7B2 306 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 CXorf36Q9H7Y0 433 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ROPN1Q9HAT0 212 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 LYRM4Q9HD34 91 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 KCNK9Q9NPC2 374 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 KLHL1Q9NR64 748 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 RASSF1Q9NS23 344 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LYARQ9NX58 379 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 DNAJB11Q9UBS4 358 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 GIMAP2Q9UG22 337 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 PHF11Q9UIL8 331 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ANAPC2Q9UJX6 822 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ZNF223Q9UK11 482 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 SNX6Q9UNH7 406 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 MRPS33Q9Y291 106 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 NTNG1Q9Y2I2 539 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 TSC22D4Q9Y3Q8 395 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 MMACHCQ9Y4U1 282 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ASB4Q9Y574 426 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SPACA6W5XKT8 324 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CNTRLQ7Z7A1 2325 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 GNG14A0A1W2PPG7 69 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 DYTNA2CJ06 578 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 GABRR3A8MPY1 467 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 J3QKU1 62 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 WWP2O00308 870 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 FOXE1O00358 373 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 CTIFO43310 598 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 PROM1O43490 865 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TYROBPO43914 113 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PCDH7O60245 1069 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 OR10H2O60403 315 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 CTNSO60931 367 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ERLIN1O75477 346 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ERAL1O75616 437 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 SEMA3DO95025 777 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 SCELO95171 688 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ESRRBO95718 433 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 MLYCDO95822 493 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TK1P04183 234 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ENO1P06733 434 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 IL3P08700 152 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ICAM2P13598 275 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 CAPN3P20807 821 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 BGNP21810 368 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ARRB2P32121 409 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 BUD31P41223 144 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 UQCRFS1P47985 274 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 MAPK12P53778 367 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 SEC24CP53992 1094 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 NR1H2P55055 460 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PKNOX1P55347 436 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TAS2R50P59544 299 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 DNAJB13P59910 316 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ERVK-8P63133 956 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 RAE1P78406 368 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 OC90Q02509 493 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 NHLH2Q02577 135 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TBL3Q12788 808 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 CSTF3Q12996 717 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 TUBA3CQ13748 450 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 RCN2Q14257 317 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ZNF169Q14929 603 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 INPP5JQ15735 1006 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 EXT1Q16394 746 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 IMPG1Q17R60 797 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ACER2Q5QJU3 275 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 SH2D4BQ5SQS7 431 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 BEND6Q5SZJ8 279 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 NDUFAF5Q5TEU4 345 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 CES4AQ5XG92 561 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 SPINK14Q6IE38 97 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TUBA3EQ6PEY2 450 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 Q6ZS92 163 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PAGE2Q7Z2X7 111 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 RPS19BP1Q86WX3 136 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 DDIASQ8IXT1 998 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 IQCKQ8N0W5 287 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms