RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 NSMAFQ92636 917 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 TGM7Q96PF1 710 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 MCCC1Q96RQ3 725 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 CSF3RQ99062 836 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 APOOQ9BUR5 198 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 SEC61A2Q9H9S3 476 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 LYARQ9NX58 379 aaKnown RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 GPR34Q9UPC5 381 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 MEIOCA2RUB1 952 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 PRKYO43930 277 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 TMPRSS11DO60235 418 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 ZNF823P16415 610 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 C5AR1P21730 350 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 RPS25P62851 125 aaKnown RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 HSF2Q03933 536 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 NTRK2Q16620 822 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 FAM71E1Q6IPT2 247 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 A0A0A6YYC8 382 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 TRBV5-4A0A0C4DH59 114 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 I3L1I5 382 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 FOXE1O00358 373 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 TSPAN4O14817 238 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 DBIP07108 87 aaKnown RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 ELAVL4P26378 380 aaKnown RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 HOXD12P35452 270 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 MAP3K8P41279 467 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 SNTB2Q13425 540 aaKnown RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 HES5Q5TA89 166 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 XAF1Q6GPH4 301 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 FRMD1Q8N878 549 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 OR5K2Q8NHB8 316 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 POLMQ9NP87 494 aaPredicted RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 TAS2R10Q9NYW0 307 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 MRTO4Q9UKD2 239 aaKnown RBP12.88□□□□□ -0.35
GSE1-203ENST00000405402 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
GSE1-203ENST00000405402 SCO2O43819 266 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 FMO6PO60774 539 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 CD3GP09693 182 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 IL7P13232 177 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 ARFIP1P53367 373 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 THOC7Q6I9Y2 204 aaKnown RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 EFHD2Q96C19 240 aaPredicted RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 CACNG6Q9BXT2 260 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 MS4A8Q9BY19 250 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 POLDIP3Q9BY77 421 aaKnown RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 PRTFDC1Q9NRG1 225 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 PCDHGB7Q9Y5F8 929 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 CCDC85CA6NKD9 419 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 SERPINA3P01011 423 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 FAUP35544 74 aaKnown RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 RPA4Q13156 261 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 PPP1R14AQ96A00 147 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 SIAEQ9HAT2 523 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 PELI2Q9HAT8 420 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 GPN1Q9HCN4 374 aaPredicted RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 COPS7AQ9UBW8 275 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 LCMT2O60294 686 aaKnown RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 RENP00797 406 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 CD2P06729 351 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 MMP11P24347 488 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 BLKP51451 505 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 NLGN4YQ8NFZ3 816 aaPredicted RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 METTL21AQ8WXB1 218 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 ASB15Q8WXK1 588 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 ZNF486Q96H40 463 aaPredicted RBP12.87□□□□□ -0.35
GSE1-203ENST00000405402 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 MROQ9BYG7 248 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 ZDHHC5Q9C0B5 715 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 OR52D1Q9H346 318 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
GSE1-203ENST00000405402 TRAPPC13A5PLN9 417 aa12.86□□□□□ -0.35
GSE1-203ENST00000405402 C2orf74A8MZ97 194 aa12.86□□□□□ -0.35
GSE1-203ENST00000405402 CLEC3AO75596 197 aa12.86□□□□□ -0.35
GSE1-203ENST00000405402 MAS1P04201 325 aa12.86□□□□□ -0.35
GSE1-203ENST00000405402 HOXC8P31273 242 aa12.86□□□□□ -0.35
GSE1-203ENST00000405402 GMFBP60983 142 aa12.86□□□□□ -0.35
GSE1-203ENST00000405402 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
GSE1-203ENST00000405402 DECR1Q16698 335 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms