RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PSMG2Q969U7 264 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 MRPL38Q96DV4 380 aaKnown RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 MCEEQ96PE7 176 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF300Q96RE9 604 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 NPY6RQ99463 290 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 NAPGQ99747 312 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ULBP1Q9BZM6 244 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 POPDC2Q9HBU9 364 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ABCC13Q9NSE7 274 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ARGLU1Q9NWB6 273 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 STAP1Q9ULZ2 295 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 TFR2Q9UP52 801 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 TMED7Q9Y3B3 224 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ALG6Q9Y672 507 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ANKRD36A6QL64 1941 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 CLUHO75153 1309 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 YJEFN3A6XGL0 299 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF487B1APH4 448 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 E7ENQ6 273 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 TTI1O43156 1089 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PSTPIP1O43586 416 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SPOPO43791 374 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 LRCH4O75427 683 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PALMO75781 387 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 GLCEO94923 617 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 FGF19O95750 216 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 IGLV3-25P01717 112 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 KRT7P08729 469 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 RALAP11233 206 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 TCP1P17987 556 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PRKACGP22612 351 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PSMA2P25787 234 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 HLA-FP30511 346 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CASQ1P31415 396 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SDC4P31431 198 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SERPINB6P35237 376 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CLK1P49759 484 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 AIF1P55008 147 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 YWHAGP61981 247 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PMP22Q01453 160 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 OGDHQ02218 1023 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 EIF4EBP2Q13542 120 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 MESDQ14696 234 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 RPS6KA1Q15418 735 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 HADHQ16836 314 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCDC14Q49A88 953 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 LRRC37A5PQ49AS3 106 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 BOLA3Q53S33 107 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ATP1A1-AS1Q5TC04 95 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZC2HC1BQ5TFG8 222 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PLPP4Q5VZY2 271 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 BSPRYQ5W0U4 402 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 IYDQ6PHW0 289 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SYT10Q6XYQ8 523 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 TMEM184AQ6ZMB5 413 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 KCTD9Q7L273 389 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 TRMT11Q7Z4G4 463 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SCD5Q86SK9 330 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PSTKQ8IV42 348 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CLYBLQ8N0X4 340 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 DEFB106AQ8N104 65 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ELMOD1Q8N336 334 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 UBL4BQ8N7F7 174 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 JOSD2Q8TAC2 188 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 RXFP2Q8WXD0 754 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ARNTL2Q8WYA1 636 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CASP10Q92851 521 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PTP4A1Q93096 173 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 FBXO32Q969P5 355 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 RFT1Q96AA3 541 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 NTAN1Q96AB6 310 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SNRNP40Q96DI7 357 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 OMA1Q96E52 524 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CNRIP1Q96F85 164 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PIWIL1Q96J94 861 aaKnown RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SERPINB11Q96P15 392 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 RASL10BQ96S79 203 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ACPTQ9BZG2 426 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 TRIM7Q9C029 511 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 CARD9Q9H257 536 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 RNF14Q9UBS8 474 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ASIC3Q9UHC3 531 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ERRFI1Q9UJM3 462 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 LEF1Q9UJU2 399 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SNX12Q9UMY4 172 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 PLCL2Q9UPR0 1127 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SATB2Q9UPW6 733 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 HYOU1Q9Y4L1 999 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 MIA3Q5JRA6 1907 aa4.2□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF840PA6NDX5 716 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF732B4DXR9 585 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 NPIPB9F8W1W9 429 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 PRPSAP2O60256 369 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 GRAP2O75791 330 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 OLFM2O95897 454 aa4.19□□□□□ -1.74
HMGB3P19-201ENST00000403971 C8orf89P0DMQ9 161 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms